Gene Bxe_C1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1280 
Symbol 
ID4010792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1344257 
End bp1346311 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content66% 
IMG OID637953870 
Productprotein-L-isoaspartate (D-aspartate) O-methyltransferase 
Protein accessionYP_556490 
Protein GI91781283 
COG category[O] Posttranslational modification, protein turnover, chaperones
[R] General function prediction only 
COG ID[COG2312] Erythromycin esterase homolog
[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.65747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.248461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT CGAGCGTGGC GCGCGAGTGG ATGGTCGAAC GACAGATCGT GCGCCGTGGG 
GTGCGCGATC CCCACCTGCT CGCCGCGATG CGACGCGTGC CGCGCGATGC GTTCGTGCCA
GCCGAACTAC GCGAATTCGC TTACGACGAC ACGCCGTTGC CTCTCGAAAA CGAGCAGTCG
ATTTCGCAAC CGGTCATCGT GGCGAAAATG CTCGAGGCCG CGCAGCTTCA TCCCGGCGAC
CATGTGCTGG ATATCGGCAC GGGCTCTGGC TACGCTGCGG CGGTCGCTGG GGAAATAGCC
GCGCGGGTGG ATTCGATCGA ACGCGACGCC GCGCTGGCCG ATACGGCCCA GGACCGATTG
GCGAGACTGG GATATACGAA CGTGGTGGTG CATCATGGCG ACGGCACGGC CGGCCTCGCG
GAACACGCGC CTTACGATGC GATCATCGCA GCCGCTGGCG GTCCGCGCGT GCCCCATGCG
TTATGTTCGC AGCTTGCGCC CGGCGGTCGC CTCATCATGC CGGTCGGCCC CGAGCCAAAC
CGGCAGCGGC TGGTGAAGAT CGTGCGTCGG GGCGAGCAGG ACTACGAAGA GCGTGTGTTG
GGAGACGTGC GATTCGTCCC GCTGGTCGGT GATGACGGCT GGCCTGAACT GGACGCCGAG
CCGCGTATGT CGCGCGCCGC CCCGATCGCC CCGACCGCCC TTGCCGCCGA GGCCGGCTTT
GCCACCTCAG CGGAGCGTTC GCAGGCGCGC GTGCCGCTGC CGCTGGAGAT CGCGATCCGC
GACGCGGCCG AAGCGCTGCC CGAGATCGAT TCCAACGAAT TCGCGCCGTT TTTCGACCGT
TTTGCCGACA AGCGCGTCGT GCTCCTTGGC GAGGCGAGCC ATGGCACGTC GGAGTTCTAT
CGCGCGCGGG CGGCGATCAC GCGGCGCCTT GTCGAGCGGC ACGGTTTCTC GACGATTGCG
CTCGAGGCGG ACTGGCCCGA CGCCGCGATG ATCGACCGGC ATATCCGCCA TCGTCCGCCG
CCGGTTGACG GCACCGCGCC GTTTCAGCGC TTTCCCAGCT GGATGTGGCG CAATACGGAT
TTCATGGCGC TGGTGGCGTG GCTTCGCTCG CGCAATAGCC GGTTGCCCGC TGATCGGCAG
GCGCGCTTTT TTGGGCTGGA CATTTACAGC CTGTCCGAGT CGATCGCCGC CGTACTGCGC
TATCTGGACA GTGTCGACCC GTACGCGGCG AGGATTGCCC GCGAGCGATA CGGATGCCTC
GGCCCATGGC AGAAAAACCC TTCGGTGTAC GGCCGCGCGG CCGTGAACGG CACCTATGCG
CATTGCGAGG AACACGTTGT CGCGCAACTC GGCGATCTGC TGAAAAAACG CCTTGATTAC
TCGCATGCGG ACGGCGAGCG GTTCCTCGAC GCTGCACAGA ATGCGCGGCT GGTCGCCGTG
GCCGAACACT ATTACCGCGC GATGTATTAC GGTGGATCGC AGAGCTGGAA TCTGCGCGAC
ACGCACATGT TCGAAACGTT GCGCCATACG CTCGACAGTC GCGGGCCCGG CGCGCGCCTC
GTGGTGTGGG CGCATAACTC GCATATTGGC GACGCGAGCG CCACGGCAAT GGGACAGGTG
CAGGACGAGA TCAACCTCGG TCAACTGTGC CGCGCGCATT TCGGCGATGC GGCAGCGCTG
ATTGGTTTTT CCACGCATCA CGGCACAGTG GCCGCGGCGA CGGAGTGGGG CGGTCCGATG
GAGGTGAAGA CCGTGCGGCC GTCGCACGAG GACAGTTACG AGTACTGGAT GCATGGCACC
GGACTTCCCC GGTTCCTGCT CGACCTTCGT CCGAAGGTCC ACGACGCGTT ACGCGAACGC
TTGCAGGGGC CGCTGCTGGA GCGGTTCATC GGCGTGATCT ACTGGCCCGA TACGGAACAC
TACAGCCACT ATGTCGAGGC GTCGCTCGCA AGTCAATTCG ACGCGCTGGT CTGGTTCGAT
CGCACCAACG CTGTCACGGC TTTGCCCGCC GCAGCCAGCG AAGGGGCCGC CGAGACCTTC
CCGTTTGGCG TGTGA
 
Protein sequence
MTDSSVAREW MVERQIVRRG VRDPHLLAAM RRVPRDAFVP AELREFAYDD TPLPLENEQS 
ISQPVIVAKM LEAAQLHPGD HVLDIGTGSG YAAAVAGEIA ARVDSIERDA ALADTAQDRL
ARLGYTNVVV HHGDGTAGLA EHAPYDAIIA AAGGPRVPHA LCSQLAPGGR LIMPVGPEPN
RQRLVKIVRR GEQDYEERVL GDVRFVPLVG DDGWPELDAE PRMSRAAPIA PTALAAEAGF
ATSAERSQAR VPLPLEIAIR DAAEALPEID SNEFAPFFDR FADKRVVLLG EASHGTSEFY
RARAAITRRL VERHGFSTIA LEADWPDAAM IDRHIRHRPP PVDGTAPFQR FPSWMWRNTD
FMALVAWLRS RNSRLPADRQ ARFFGLDIYS LSESIAAVLR YLDSVDPYAA RIARERYGCL
GPWQKNPSVY GRAAVNGTYA HCEEHVVAQL GDLLKKRLDY SHADGERFLD AAQNARLVAV
AEHYYRAMYY GGSQSWNLRD THMFETLRHT LDSRGPGARL VVWAHNSHIG DASATAMGQV
QDEINLGQLC RAHFGDAAAL IGFSTHHGTV AAATEWGGPM EVKTVRPSHE DSYEYWMHGT
GLPRFLLDLR PKVHDALRER LQGPLLERFI GVIYWPDTEH YSHYVEASLA SQFDALVWFD
RTNAVTALPA AASEGAAETF PFGV