| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1250 |
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| Symbol | |
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| ID | 4010762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 1304817 |
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| End bp | 1305947 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637953840 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_556460 |
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| Protein GI | 91781253 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.748402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCTGC TGGCTGCTGG ATGCATCATC AACCCTTCTG CACATGCGCA ATCCAGCGTT
ACGCTTTACG GTATCCTGGA CGAAGGTCTG ACCTATACGA ATAACCAGCA TGGCAGTGGC
GCATGGCAGG CGACCAATCA GAATGTTGAC GGTACCCGAT GGGGATTGCG CGGAACCGAG
GATTTAGGCG GAGGATGGAA GGCCGTTTTC ACGCTTGAAA ACGGCTTCTC GCTGACAAAT
GGTGGCGCGG GATCGAGCAG TCAGCTGTTT AATCGCCAGG CTTTTGTCGG ATTGGCTTCT
GATGGTTACG GTTCGGTGAC GCTGGGCAGG CAATATGATT CGGTTGTCGA CTATCTGGGT
GCGCTGGCAC TAACCGGTAC CGGGTACGGT GGTGTGCATT CCGCTCACCC GTTCGACAAC
GACAATCTCG ACGACTCGTT CAGGGTGAAC AACTCCGTCA AATATACCAG CGTGAACTAC
CACGGCCTGA CCTTCAGCGG CCTTTATGGA TTTTCGAACC AGGCCGGTGG ATTTGCCGCA
AACCGCGCTT ACAGTGGGGG CGCTTCCTAT GATTTTGGAG GTTTCCATCT GGCAGCGGCT
TATCTGCAAT TGAACAATTC CGGCGCCACT GTGGGATTCA ACAGCGCCGG ATCCGTAACG
GGGGATGCAA CGTTTAACGC GTCGCGGCAA CGGACGTTCG GTGCCGCCGC GACTTATTCG
TTTGACAAGG GCGGGGTTGG ATTCCTGTTC ACAGAAACCA GGCTCCAGAA TGCCACGGGG
ATCAATGCAT ACGCGTCCGG CACTGCAAGC GGTATTGGTC TGTCGGGCGG AGATGTGCGG
TTCGACAATT ACGAGTTGAA TGGACATTAC AGTGTGACCC CAGCCATTAC CCTGTCAGGT
GGCTATACCT ATACCGACGG TCGTCTGGAT GGAATCAGTC CCAAGTGGAA CCAGGTGAAC
TTTCTCGCGG CTTACGCATT TAGCAAGCGC ACGGATGTCT ACTTGCAGAC TGACTGGCAG
CACGTAAGCG GTCTGTCGGG GACGGGCATC GGCGCTGATC TCATTGGCCT TCCCGCATCG
AGTACGAATC AGCAAGTCGC CGTATCGGTC GGGATTCGTC ACTTCTTCTG A
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| Protein sequence | MGLLAAGCII NPSAHAQSSV TLYGILDEGL TYTNNQHGSG AWQATNQNVD GTRWGLRGTE
DLGGGWKAVF TLENGFSLTN GGAGSSSQLF NRQAFVGLAS DGYGSVTLGR QYDSVVDYLG
ALALTGTGYG GVHSAHPFDN DNLDDSFRVN NSVKYTSVNY HGLTFSGLYG FSNQAGGFAA
NRAYSGGASY DFGGFHLAAA YLQLNNSGAT VGFNSAGSVT GDATFNASRQ RTFGAAATYS
FDKGGVGFLF TETRLQNATG INAYASGTAS GIGLSGGDVR FDNYELNGHY SVTPAITLSG
GYTYTDGRLD GISPKWNQVN FLAAYAFSKR TDVYLQTDWQ HVSGLSGTGI GADLIGLPAS
STNQQVAVSV GIRHFF
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