| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1231 |
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| Symbol | |
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| ID | 4010743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 1285798 |
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| End bp | 1286988 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637953821 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_556441 |
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| Protein GI | 91781234 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00623674 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT CAATTATCGC GTTCGTCGCA CTCGGCACAC TAGCCGGCGC CGCACACGCA
CAAAGCAGCG TCACCCTGTA CGGCATCATC GACGAAGGGC TCGACATGAT CACCAACAAC
AAGGGTGGCC ACGTATACCA GTTAGCCTCG AGCGTGATGC AGGGCAACCG GTTCGGCCTG
ACCGGCGCCG AAGACCTCGG CGGCGGCATG AAGGCGGTAT TCCTGCTCGA AAACGGTTTC
AACCTTAACA GCGGCGCCCT CAGCCAGAAC GGCCTGATGT TCGGCCGCCA GGCCTGGGTC
GGCCTCGCGA GTCAATACGG CACGGTCACG TTCGGTCGCC AGTACGACTC GATTTTCGAC
TATGCGGCTC CGCTCGCGGC CGGCCAACTG GGTGGTGGCG TGTACGGCGC GCACCCGGGT
GACCTCGACG ACTCGAACAT CGATTACCAC TCGAACAGCA GCATCAAATA TGCAAGCCCC
ACCTTTTCGG GTTTCAAATT CGGCGGTACG TACAGTCTCG GCGGTACGCC TGGCAACTTC
ACCAACAACC AGATCTGGTC GCTCGGCGCT GCTTATAACC AGGGACCAGT CGCCCTCGGC
GCCGCCTACC TGAACGCGCG CAATCCGGGC ACCGGCATGT TCAGCACGGC CGCGTCGAGC
CTGCCCGAAA CCTTGATGAC GCCGATCTAC TCCGGCTTTA TGAGCGCGAA CACGTTTCAA
TTGATCGATT TCGGCGGATC CTATACGTTC GGGCCGGCGA CGCTCGGCGC CACGTATACG
AACGCCAAGT TCATGGATTT GGGCAGCAAT CCGATGCCGA CCGGCGCCAA GGGTCCGGCC
GGCGGCTACA CGACGGGTAG CACGGCGACC TTCAATGACG TGCAGGTCAA TTTCCTCTAT
CGGATCACGC CCGCTTTGCG CTTGCTCCTG GCGTCCGATT ACGTCCATCG CAATGCGCTC
ACGGACCAGG ACGGAAAATC AATCGAAAGC GCGAAGTACC TGCAATACGA CGCCTCGCTC
GACTACTCGC TGTCCAAGCG CACCGACGTC TATGTAATGG CGCTGTACCA ACGCGCGCTC
GGCGACGACT CCACAGGCGG CCCGGCCGTC GCGGCCATCA CCGATACCAC CGCGATTTCG
TCGAATGGCA AGCAGTTCCT TGCACGTATT GGAATTCGCC ACAAGTTCTG A
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| Protein sequence | MKKSIIAFVA LGTLAGAAHA QSSVTLYGII DEGLDMITNN KGGHVYQLAS SVMQGNRFGL
TGAEDLGGGM KAVFLLENGF NLNSGALSQN GLMFGRQAWV GLASQYGTVT FGRQYDSIFD
YAAPLAAGQL GGGVYGAHPG DLDDSNIDYH SNSSIKYASP TFSGFKFGGT YSLGGTPGNF
TNNQIWSLGA AYNQGPVALG AAYLNARNPG TGMFSTAASS LPETLMTPIY SGFMSANTFQ
LIDFGGSYTF GPATLGATYT NAKFMDLGSN PMPTGAKGPA GGYTTGSTAT FNDVQVNFLY
RITPALRLLL ASDYVHRNAL TDQDGKSIES AKYLQYDASL DYSLSKRTDV YVMALYQRAL
GDDSTGGPAV AAITDTTAIS SNGKQFLARI GIRHKF
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