| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1157 |
|---|
| Symbol | |
|---|
| ID | 4010669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 1214644 |
|---|
| End bp | 1215291 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637953751 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_556371 |
|---|
| Protein GI | 91781164 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.505737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCACA CAACAATTTC CATTGCGGAC GATCACCCTT TTGTTCTTGC CTCCATGACC
GCCGTTCTGC AGGGAGTCCC CCAATTCGCC GTCGTACATC AGTGTGCGAA CGGAAAAGAT
CTACTCGACG CGCTATCCAA GGTAGAAACG GATCTGGTCG TCACGGATTT TTCGATGACG
CGTGAAGACC GCTCGGTAGA TGGCTTCGGC TTGCTAGCCG AACTCCGTCG CCGGCATCCG
GATGTAAAAA TCGTTCTCCT GACGGCCTTG GTCAACGCTG GAATCTTTAC AAGAGCGCTT
AGCGTGGGTG TAGGGGCGTT GGTGAGCAAA ACGGATTCCA TCAGTGAACT GGCGCGAGCA
TGCGCGCGTG TAAAGATCAG TCGCTCGCCG TACCTTTCTC CTGCCGTGCA GTCCATTATT
CATGGCGCAT CGATGGATCA CCCCAACACC TCGAAGGCCA GGCTGACGCC CAAAGAACTG
GAAGTTGTGC GCCTATTGGT TGCAGGCCGG TCGCTCGCCC AGATCGCATC CCAACTGGGC
CGCTCCCCCA GCACCATCTC CACGCAGAAA TACAACGCCT CCAGGAAGAT CGGCGCAACT
TCCTACACAC AATTGATCCG GTATGCTTAC GAGAACGGTC TGACCTGA
|
|---|
| Protein sequence | MHHTTISIAD DHPFVLASMT AVLQGVPQFA VVHQCANGKD LLDALSKVET DLVVTDFSMT
REDRSVDGFG LLAELRRRHP DVKIVLLTAL VNAGIFTRAL SVGVGALVSK TDSISELARA
CARVKISRSP YLSPAVQSII HGASMDHPNT SKARLTPKEL EVVRLLVAGR SLAQIASQLG
RSPSTISTQK YNASRKIGAT SYTQLIRYAY ENGLT
|
|---|
| |