Gene Bxe_C1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1054 
Symbol 
ID4010566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1090948 
End bp1091658 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content65% 
IMG OID637953651 
ProductTonB protein 
Protein accessionYP_556271 
Protein GI91781064 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCG CGATGGCCGT CGCGCTCCAT CTCGTCGCGC TTTATTTCCT GACCGCAAGG 
CAAGTAGACA TACACCTGGC CAGCGAGCAG CAGCCCGGGG CCACCACGAT TAGCGTGTCG
CTCGTCGCGG CTCCTCCTGT GCCAATGGCT GCTCCCGTTG CGCAAACGGT GGCGGCGGTG
CCACCTCGCG CTGAACCACA GCGACACGCG AAGGCAACGA AAGTGCTTGC AACGCATCGC
GACTCGAAGG CAACGACGGC GCAACAGGCG CGCGCGCCGC AAACGGTCCC CACGTCGCCA
GCACCGGTAA CGAAGCAGGT TATGCCGCCG GTGTCGTCGC CGGCTGCTTT GCCGTCGGCT
TTGTCCACCG CGCAGGCTGC GGCTGCGCAC CCGGACGACG GCAAACTGAT GAGCCTGCCG
AAGGTGATCG GTGCCTCGTC CCTGAACCAG TTGGGCTGCC GCATTCCACG TCCGACCTAT
CCTGCGCGCG CGAGGCGCCT TGGCGAGAGC GGCGTTGTGC GTCTGCGTAT CCGGATAGCC
GTAGACGGTC ATCTTGCGGA TGTGCAGGTG GTGCAGAGCA GTGGTTTTCC CGACCTCGAT
ACCGAGGCTG TCCATGCTGT TTCGGCGGGA AGTTGCGAAC CATACCGCGA AAACGGTGTC
GCGACGGCGG TGACCGCCGA ACAGCCCGTC GCGTTCGACC TCGATCCCTG A
 
Protein sequence
MAFAMAVALH LVALYFLTAR QVDIHLASEQ QPGATTISVS LVAAPPVPMA APVAQTVAAV 
PPRAEPQRHA KATKVLATHR DSKATTAQQA RAPQTVPTSP APVTKQVMPP VSSPAALPSA
LSTAQAAAAH PDDGKLMSLP KVIGASSLNQ LGCRIPRPTY PARARRLGES GVVRLRIRIA
VDGHLADVQV VQSSGFPDLD TEAVHAVSAG SCEPYRENGV ATAVTAEQPV AFDLDP