| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1029 |
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| Symbol | |
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| ID | 4010542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 1065179 |
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| End bp | 1066537 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637953629 |
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| Product | major facilitator superfamily aromatic acid/H(+) symporter |
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| Protein accession | YP_556249 |
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| Protein GI | 91781042 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.000542182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAAG CGGCAAGCCA GAGTGTCGAT GAGTTCATCG ACTCGCAGCC CGTGTCGGGT
TATCAGCGGA GTATCATTTT CTTCTGCTTT CTCGTGGTCG CGCTGGACGG ATTTGACTCT
GCGTGCATCG GGTTCGTCGG CCCCGCAATC CGCGCGCATT GGCAACTGAC GGTGGCAGCG
CTTTCTCCGG TTTTCGGAGC GGGTCTGTTC GGCACCATGG CTGGAGGCAT TCTGCTAGGT
CCCGTGGCGG ACAGATACGG ACGCAAGACC GTGCTCGTTG CATCCGTCGC GCTGTTTGGC
CTTGCAAGCG TCGTGTCGGC GTTCTCGCCC GACATTCATT TTCTCGCCTT CATGCGATTC
GTAACCGGGA TCGGCCTTGG CGGCGCAATG CCGAACTCGA TCACGTTGAC ATCGGAGTAT
TGTCCGGGTG CAAAGCGTTC GGGCTATGTG ACGCTGATGT TCTGCGGCTT CACGATCGGG
GCGTCGGCTG GAGGGCTCCT CACGGCAGAG ATCGTCGGCA CGGTCGGCTG GCAAGGCATT
CTCGTCGCTG GCGGCGTTTT ACCGTTGCTG CTGGTGCCTT TTCTGATGGG GTTTCTGCCT
GAATCGATCA GATACCTTTT GTTGATTGAC CGGGCGAAGT CTTATGTGCG CGTGGCAAGC
ATCGCGTCGA GGGTCGCGGC GCCGGGCGTG ACAGTCCCAC GGCTGCGGGC GGACGAAAAA
GTACGGCGGT CGCCGGTAAA AGCACTCTTT GAGAAAGGCG TGGTAACGGG GACGCTTCTG
ATCTGGACGA TTTTTTTTAG TAGTCTTCTG ATTATCTATC TGTTGACGAG CTGGATGCCC
GTGTTGCTTT CCAGTGCGGG AATTCCGCTA GAGTCCGCCG CGTTGATCTC GATGATGCAT
CAGGTCGGAG CCGCGCTTGG CTGCATCTGG CTGGGCCGGC AAATGGACCG GTTCAATCCG
CATCGTGTAC TGGCGTGGTC CTATTTCGTC GCGATTCCGA TAATCGTGCT TTGCGCATTT
TCCGGAAGCC ACAAGGCCCT GCTCGTGTTG TCGGTTTTTG CGCTCGGTTT TCTGATAAGC
GGCGGGAATA TCGGTGCCTA TGCGCTGGTT TCAGGCTATT ACCCGACGAG CAGTCGATCG
ACCGGTGTGT CGTGGGCCAA TGCCGTTGGA AGAGTCGGCG CGGCGTTAGG GTCGATGGCC
GGCGGACTGA TGATGGCCGC CGGCCTGAGG CTGCAGGAAA TCATTCTCGT ACTTGCGATT
CCCGCGGCCG TTGCAACGGG CTGCCTGTGC CTGCTGGGCA TCATCCGTTC GCACCGGAAG
GCCGGACCGG TTGGCGAGCC GGTTCACAGC CTGCACTGA
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| Protein sequence | MQEAASQSVD EFIDSQPVSG YQRSIIFFCF LVVALDGFDS ACIGFVGPAI RAHWQLTVAA
LSPVFGAGLF GTMAGGILLG PVADRYGRKT VLVASVALFG LASVVSAFSP DIHFLAFMRF
VTGIGLGGAM PNSITLTSEY CPGAKRSGYV TLMFCGFTIG ASAGGLLTAE IVGTVGWQGI
LVAGGVLPLL LVPFLMGFLP ESIRYLLLID RAKSYVRVAS IASRVAAPGV TVPRLRADEK
VRRSPVKALF EKGVVTGTLL IWTIFFSSLL IIYLLTSWMP VLLSSAGIPL ESAALISMMH
QVGAALGCIW LGRQMDRFNP HRVLAWSYFV AIPIIVLCAF SGSHKALLVL SVFALGFLIS
GGNIGAYALV SGYYPTSSRS TGVSWANAVG RVGAALGSMA GGLMMAAGLR LQEIILVLAI
PAAVATGCLC LLGIIRSHRK AGPVGEPVHS LH
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