| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0936 |
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| Symbol | |
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| ID | 4010449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 971347 |
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| End bp | 973317 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637953541 |
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| Product | branched chain amino acid ABC transporter inner membrane protein |
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| Protein accession | YP_556161 |
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| Protein GI | 91780954 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0175058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTG ATTTTATTGG TGCGATTGCC GGCCAATTGC TGATCGGGCT GGTCAATGGC
TCGTTTTATG CGCTGATGAG CCTTGGGGTC GCGGTGATCT TCGGAATGCT GAGGATCGCC
AATTTTGTGC ACGGCGCGCA GTTCATGCTG GGCGCGTTCC TCGGCTGGTT CCTGTTAGGC
TTGCCGACGC TGTTCCCGGG TTTGGGACTG CCTTCGGTCG GTTACTGGCC GGCCCTCGTG
ATCGTTCCGC TCGCCATCGG TGCGGTGGGC GTTCTGACCG AAAAGCTGTT CATCAGCAGG
GCGTACAAGC TCGATCCGTC GTACGGCGTG CTGCTGACGC TCGGCCTGTC GCTTGTTATT
GAAGGCATCT TTCATGTTGG GTTTGGCTCG TCCGGCAAGC CTTATGACGT GCCGCTGGAG
TTGGCAAACG GTTGGGACCT CGGGTTCCTG TATTTGCCGT TTTACCGGGC ATGGGTGCTG
GCGGCTTCGA TGCTGATCTG CTTCGGCACC TGGTATCTGA TCGAGCGCAC GCGCCTTGGG
GCTTATCTAC GCGCGGCCAC CGAGAACCCA GTCGTGGTGG AATCGTTCGG CATCAACGTG
CCGCGGATGC TAACGTTGAC GTATGGGCTT GGCGTCGGAC TGGCAGGGTT GGCCGGACTC
ATGGCGGCGC CGATCTACCA GGTCAGTCCG CAGATGGGCC AGAATATTAT TATTGTGGTA
TTCGCGATCG TCGTAATCGG CGGGATGGGA TCGATCTTCG GCGCCATCTT TAGTGGTTTT
GCGCTTGGTT TGATCGAAGC ACTAACGAAG GTTTTTTATC CGCAAGCATC GAGCACCGTG
ATTTTCGTGA TCATGGCGAT TGTCCTGGTG GTGCGGCCTC AAGGGCTGTT CGGCGTTTTC
AGCGAATCGA CACATACGGC CGTACCAGGT ACCGCCAGTA CGGATTCCAG CCGGCTCGGC
ACGCATCGGG AATGGCTATA TCTGCTGTTC CTCGGTGGGT TCGGTATCGT GGCGCCTCAC
TTCGTATACC CGACTTTCCT GATGGAAATC CTGTGCTTTG CGCTGTTCGC CTGCGCTTAC
AACCTGATAT TCGGCTATGT CGGGCTGGTG GCTTTCGGTC ATGCGGCTTT CTTCGGTGCG
GCAATCTATG TTGCCGCCCA GACCGCGAAG TTCTGGGGCA TTTCGCCGGA ACTCGCCATC
CTGCTTGGCA CGCTGGCGTC CACGATGCTC GGACTGGTCG TCGGTGCGAT AGCGATCCGG
CGCCGGGGTT TGTACTTCGC GATGATTACG CTGGCGCTCG CACAACTGGT CTACTTTTAT
GGTGTGCAGG CGTCTTGGAC CAAGGGCGAA GACGGTCTGC AAGATGTGCC GCGCGGCAAG
TTGTTCGGGC TATTCAGCCT TCATCAGGAT GCGGTGCTCT ACTATTTCGT GCTCGCGGTG
TTCCTGACAG GTTTCGCGGT AGTTCACCGA GCGGTTCGCT CTCCGTTTGG AAAAGTATTG
AGAGCAATTC GCGACAATGA GCAGCGAGCG GTCTCGCTCG GCTACGACAC CGACCGGCTC
AAGCTGATCG CCTTCACCAT ATCCGCTGGT TTGTCGGGCC TCGCTGGCGG CACGATGGCA
ATCGTCTTTC AGGTTGCAAC ACTCAATAAC CTGTTTTTTA CGACTTCCGC GGAGGTCTTG
CTGATTGTCC TGATCGGAGG AGCCGGGACG ATTCTGGGAC CAGTGGTCGG AGCTGTCATC
GTGGTCTCGA TGGGGCATTA CCTGGCCAGT ACAGGCTCCT GGGTGCTGAT CATCCAGGGT
GTGACATTCG TGCTGTGCGT GCTCACGTTA CGCAAGGGCG TGGTCGGTAC ATGGCTCGAT
TTCTTCGAAC GCAGGCGCTA CCGGCGCAGT CGCCCGGCGG CGCGGGCAAC CACGGTCGGC
GTGACACGGT TGTCAGCTCC GGATGCTGTT TCTCCGGATG GATCGAATTA A
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| Protein sequence | MNADFIGAIA GQLLIGLVNG SFYALMSLGV AVIFGMLRIA NFVHGAQFML GAFLGWFLLG
LPTLFPGLGL PSVGYWPALV IVPLAIGAVG VLTEKLFISR AYKLDPSYGV LLTLGLSLVI
EGIFHVGFGS SGKPYDVPLE LANGWDLGFL YLPFYRAWVL AASMLICFGT WYLIERTRLG
AYLRAATENP VVVESFGINV PRMLTLTYGL GVGLAGLAGL MAAPIYQVSP QMGQNIIIVV
FAIVVIGGMG SIFGAIFSGF ALGLIEALTK VFYPQASSTV IFVIMAIVLV VRPQGLFGVF
SESTHTAVPG TASTDSSRLG THREWLYLLF LGGFGIVAPH FVYPTFLMEI LCFALFACAY
NLIFGYVGLV AFGHAAFFGA AIYVAAQTAK FWGISPELAI LLGTLASTML GLVVGAIAIR
RRGLYFAMIT LALAQLVYFY GVQASWTKGE DGLQDVPRGK LFGLFSLHQD AVLYYFVLAV
FLTGFAVVHR AVRSPFGKVL RAIRDNEQRA VSLGYDTDRL KLIAFTISAG LSGLAGGTMA
IVFQVATLNN LFFTTSAEVL LIVLIGGAGT ILGPVVGAVI VVSMGHYLAS TGSWVLIIQG
VTFVLCVLTL RKGVVGTWLD FFERRRYRRS RPAARATTVG VTRLSAPDAV SPDGSN
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