| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0914 |
|---|
| Symbol | |
|---|
| ID | 4010427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 948619 |
|---|
| End bp | 949923 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637953519 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_556139 |
|---|
| Protein GI | 91780932 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00481205 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.205021 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGCA TACCGCCAGG GAGATGGTTC CGCAAACTGC GGTTGACCAT GGGTATGGCG
ACTTTTTTCG ATGCTTTCGA CTCGCTGGCT ATTGCGGCAG CGTTGCCGGC GCTGTCGGCA
ATCTGGCATC TGAAGCCGAC TGACATGGGT GTGCTGATCT CGGTTGGCTA TGCCGGCCAA
CTGCTGGGAG CACTGGTACT CGGTCGCTTG GCCGAGGCGC GGGGTCGAAC CAACGCGGCC
CTTATCTCTG TGGCGATTTT CACGTTGTTT TCCGCGCTTT GTGCCCTCGC GCCGTCATAT
ACCTGGCTGT GCGCGTGCCG ATTTCTTCAG GGGGTGGGGC TTGGGGGCGA AGTGCCGATT
GCGGCGGCTT ACATCAACGA ATTTAGCCGG GCCAAGGGAC GGGGGCGTTC CTTCGTGCTA
TATGAAGCGA GCTTCACGTT GGGTTTGGTG TTTTCAAGCC TCGTAGGCGC CTGGATCGTG
CCGCAAATGG GGTGGCGGGT GTTGCTGGCT TTGGGTGCTG TTCCGGCTGT CATTATCCTT
TGGGCGCGTC GCAGTCTGCC CGAATCTCCA CGCTGGCTTG CGGAGCACGG GCGCCTTGCC
GAGGCCGATG AAGTCGTCTC GCGGATTGAG CGTAGCGTAG AAGAAGAAGG CAAGACGCTG
CCTCCGCCAG CCAAAGCAGT TCCACGGCCA GCGATGGCGC GAACGCGTAT TTTGACCCGA
ACGAGCCTGG TGCGAAGTCT GTCAGTCTGG GCAATGTGGT TTGCATGCTA TTTTCTGTCA
TACGGCGTGG GGACCTGGGC TCCCACGATC TTGCGGACTG CTCTGCACTT ACCCTTGCAG
CAGGCGCTGC TGTTCTCGTT TGTGCTCCAG ACTTTGTACC TTTGCGGAAC TCTTGGTACG
GCAGTGCTTG TCGACAGATT GGGGCGAAAG ATATATTTCC GAGTGGCTTT TGCTGGCGTG
AGCATTGCCC TTTTCTGCGC CTATAGCATG GCAGGCAATG AAATTGCCCT GATGGCGTTA
ATTGCGGGAG CGTTTGTTTT CAACGCTGCA ATCTCGGTCA CGCTTTACCT GTACACGCCT
GAAATTTATC CCACGACGGT ACGGGCAAAG GGAAGCGCAT TTGCAACATC ATTCGCGCGA
CTCGCCTCCA TTACCAGTCC CCTGGCTATC GGCGCGATAA TGCAGCACGC CGAGTTTTCG
CAGATTTTTC TGATGCTGGG ACTGGTAGCA CTTGTGATAG GCGGAAGCGG TGCCCTGTTC
GTAACTGAAA CGCGTAATCG CGTACTGGAA GATATTCCTC AATAG
|
|---|
| Protein sequence | MERIPPGRWF RKLRLTMGMA TFFDAFDSLA IAAALPALSA IWHLKPTDMG VLISVGYAGQ
LLGALVLGRL AEARGRTNAA LISVAIFTLF SALCALAPSY TWLCACRFLQ GVGLGGEVPI
AAAYINEFSR AKGRGRSFVL YEASFTLGLV FSSLVGAWIV PQMGWRVLLA LGAVPAVIIL
WARRSLPESP RWLAEHGRLA EADEVVSRIE RSVEEEGKTL PPPAKAVPRP AMARTRILTR
TSLVRSLSVW AMWFACYFLS YGVGTWAPTI LRTALHLPLQ QALLFSFVLQ TLYLCGTLGT
AVLVDRLGRK IYFRVAFAGV SIALFCAYSM AGNEIALMAL IAGAFVFNAA ISVTLYLYTP
EIYPTTVRAK GSAFATSFAR LASITSPLAI GAIMQHAEFS QIFLMLGLVA LVIGGSGALF
VTETRNRVLE DIPQ
|
|---|
| |