Gene Bxe_C0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0849 
Symbol 
ID4010362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp876777 
End bp877931 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content60% 
IMG OID637953458 
ProductOmpC family outer membrane porin 
Protein accessionYP_556078 
Protein GI91780871 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0153062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0195066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGA TCCGCTATCA ACACGCGTGC GCTGTCATGT TCCTGATCGC CGGCGCGGCG 
CATGCGCAGA GCAGCGTCAC GCTCTACGGA GTTGTGACAG ATGGTTTGAA CTTTACGAGC
AATGGTGGAG GGCATACGAG TTTTCGGATG CAAAGCGGCG ATGTGCCGAA CAGTCGTTGG
GGACTGTTGG GAAGCGAAGA TCTCGGCGGC GGCTACAAGG CGGTCTTCAG GCTCGAAAAC
GGGTTCGACG TCAATACGGG CGCCTTGCAA CAGGGCGGCC GGGAATTCGG ACGGCAGGCC
TACGTCGGTC TCGCATCCGA TCGCTACGGC ACGCTGACGC TCGGCCGCCA ATACGACCCG
ACCGTCGACC TCTTCAGTGG CTTCACGGGA GCGGGCAGCT GGGCGGGCGT TGCCGCGGGT
CATCCGTTCG ACAACGACAA TACCGATTGG GATTTCCGCG TCAACAATGC GATCAAGTAC
GTGAGCCAGA ACTGGCATGG CTTGACCGTC GAAGGCATGT ATGCGTTCAG CGATCAGGCC
GGCGGTTTCG CCGACAACCG TCTGTATAGC GCCGCCGTTC AGTATCAGAA CGGTGGACTG
AGAGCGGCGG CTGCCTATCT CAAGATCAAC AATGGCGGCC TGGCGACCGG AGCCGTGACC
AGCGATACCG TGTTTACCGG CTCATCGGAG CAGAACATCG ACGCGGGTGT CTCGTACAGG
TTTGAAAAGG CCCAGGTGAG CCTCGCCTAT TCGCATGTCG ATATGTATGA CCCGACGGCT
GGTGTCTGGT TGCCCGCGGC CGGAGTGCAA CCTCGCGGGG GCAAATGGAA TGCGTGGAAG
TTCAACAATA TCGAGGTGAA CGGCCAGTAT TTCTTGCCGC ACGGCTTCTC CGTCGGTGCC
GCATACACGT TCACGGCTGC GCGGCTCGCA TCGACAGTGG GCGAATACAG CCCCAAGTGG
CATCAACTCG CACTCATGTT GAACTACGAC CTGAGCAAGC GCACGGCTGT GTATTTGCAG
GGAGCGTATC AGCATGTGGT GAGCGCCCAT ACCGGCACCG ATTTCGATTT CGCGCAGATC
CCGCTGATCG GAGCGGGCCT CTCGTCCAGT GTGAACCAGG GTGTGATACG TGTGGCTATG
GTTCACCGGT TCTGA
 
Protein sequence
MKPIRYQHAC AVMFLIAGAA HAQSSVTLYG VVTDGLNFTS NGGGHTSFRM QSGDVPNSRW 
GLLGSEDLGG GYKAVFRLEN GFDVNTGALQ QGGREFGRQA YVGLASDRYG TLTLGRQYDP
TVDLFSGFTG AGSWAGVAAG HPFDNDNTDW DFRVNNAIKY VSQNWHGLTV EGMYAFSDQA
GGFADNRLYS AAVQYQNGGL RAAAAYLKIN NGGLATGAVT SDTVFTGSSE QNIDAGVSYR
FEKAQVSLAY SHVDMYDPTA GVWLPAAGVQ PRGGKWNAWK FNNIEVNGQY FLPHGFSVGA
AYTFTAARLA STVGEYSPKW HQLALMLNYD LSKRTAVYLQ GAYQHVVSAH TGTDFDFAQI
PLIGAGLSSS VNQGVIRVAM VHRF