Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0849 |
Symbol | |
ID | 4010362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 876777 |
End bp | 877931 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637953458 |
Product | OmpC family outer membrane porin |
Protein accession | YP_556078 |
Protein GI | 91780871 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0153062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0195066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGA TCCGCTATCA ACACGCGTGC GCTGTCATGT TCCTGATCGC CGGCGCGGCG CATGCGCAGA GCAGCGTCAC GCTCTACGGA GTTGTGACAG ATGGTTTGAA CTTTACGAGC AATGGTGGAG GGCATACGAG TTTTCGGATG CAAAGCGGCG ATGTGCCGAA CAGTCGTTGG GGACTGTTGG GAAGCGAAGA TCTCGGCGGC GGCTACAAGG CGGTCTTCAG GCTCGAAAAC GGGTTCGACG TCAATACGGG CGCCTTGCAA CAGGGCGGCC GGGAATTCGG ACGGCAGGCC TACGTCGGTC TCGCATCCGA TCGCTACGGC ACGCTGACGC TCGGCCGCCA ATACGACCCG ACCGTCGACC TCTTCAGTGG CTTCACGGGA GCGGGCAGCT GGGCGGGCGT TGCCGCGGGT CATCCGTTCG ACAACGACAA TACCGATTGG GATTTCCGCG TCAACAATGC GATCAAGTAC GTGAGCCAGA ACTGGCATGG CTTGACCGTC GAAGGCATGT ATGCGTTCAG CGATCAGGCC GGCGGTTTCG CCGACAACCG TCTGTATAGC GCCGCCGTTC AGTATCAGAA CGGTGGACTG AGAGCGGCGG CTGCCTATCT CAAGATCAAC AATGGCGGCC TGGCGACCGG AGCCGTGACC AGCGATACCG TGTTTACCGG CTCATCGGAG CAGAACATCG ACGCGGGTGT CTCGTACAGG TTTGAAAAGG CCCAGGTGAG CCTCGCCTAT TCGCATGTCG ATATGTATGA CCCGACGGCT GGTGTCTGGT TGCCCGCGGC CGGAGTGCAA CCTCGCGGGG GCAAATGGAA TGCGTGGAAG TTCAACAATA TCGAGGTGAA CGGCCAGTAT TTCTTGCCGC ACGGCTTCTC CGTCGGTGCC GCATACACGT TCACGGCTGC GCGGCTCGCA TCGACAGTGG GCGAATACAG CCCCAAGTGG CATCAACTCG CACTCATGTT GAACTACGAC CTGAGCAAGC GCACGGCTGT GTATTTGCAG GGAGCGTATC AGCATGTGGT GAGCGCCCAT ACCGGCACCG ATTTCGATTT CGCGCAGATC CCGCTGATCG GAGCGGGCCT CTCGTCCAGT GTGAACCAGG GTGTGATACG TGTGGCTATG GTTCACCGGT TCTGA
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Protein sequence | MKPIRYQHAC AVMFLIAGAA HAQSSVTLYG VVTDGLNFTS NGGGHTSFRM QSGDVPNSRW GLLGSEDLGG GYKAVFRLEN GFDVNTGALQ QGGREFGRQA YVGLASDRYG TLTLGRQYDP TVDLFSGFTG AGSWAGVAAG HPFDNDNTDW DFRVNNAIKY VSQNWHGLTV EGMYAFSDQA GGFADNRLYS AAVQYQNGGL RAAAAYLKIN NGGLATGAVT SDTVFTGSSE QNIDAGVSYR FEKAQVSLAY SHVDMYDPTA GVWLPAAGVQ PRGGKWNAWK FNNIEVNGQY FLPHGFSVGA AYTFTAARLA STVGEYSPKW HQLALMLNYD LSKRTAVYLQ GAYQHVVSAH TGTDFDFAQI PLIGAGLSSS VNQGVIRVAM VHRF
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