Gene Bxe_C0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0442 
Symbol 
ID4009956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp463712 
End bp464116 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content60% 
IMG OID637953076 
Productnitrogen regulatory protein NtrR 
Protein accessionYP_555696 
Protein GI91780489 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.315733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGGCT ATCTGCTCGA CACGAACATC ATCAGCGACA TGATCCGGAA TCCGTTCGGA 
CAGGTGGCCG CCCGTATTGA GCAGATTGAT CCCAGGGCGA TCTGCACGAG CGTCGTCGTC
GCGGCGGAAC TGCGCTATGG CTGTGCAAAA AAGGGGTCCG CGAAGTTGCT GGCCAGAGTC
GAAAGTCTCC TTGCAACCAT TCCCGTGCTG CCGCTGGACG TCCCTGCCGA CACGGAATAC
GGGGGCATCC GCGCGGAGCT TGAGGCCGCC GGCCAGCCGA TCGGTGCAAA CGACCTTTTG
ATTGGCGCTC ATGCCTACGC ATTGGGGCTG ACACTCGTGA CTGACAACAC GAAAGAGTTC
AGCCGCATTC GCGGTCTCAC GATCGAGAAC TGGCTTGACC GGTAG
 
Protein sequence
MSGYLLDTNI ISDMIRNPFG QVAARIEQID PRAICTSVVV AAELRYGCAK KGSAKLLARV 
ESLLATIPVL PLDVPADTEY GGIRAELEAA GQPIGANDLL IGAHAYALGL TLVTDNTKEF
SRIRGLTIEN WLDR