| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0332 |
|---|
| Symbol | |
|---|
| ID | 4009846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 363310 |
|---|
| End bp | 364575 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637952977 |
|---|
| Product | beta-ketothiolase |
|---|
| Protein accession | YP_555597 |
|---|
| Protein GI | 91780390 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000000471879 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00997806 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGGT CGCCCTTGAC TTCATTTGAG CGACCGCTTG TTCAAACGCC AACCCCAGAG
CGAGAATTTT CAGTGACTGG TAATACAGAC ATCTTCGTCG TTGCTGCAGC ACGTACCGCA
ATTGGCACCT TTGGCGGCTC ACTGAAGGAC GTGCCGCTTG CGCAACTCGC GATCCTTGCC
GTTCGCGGCA CGCTCGAGCG CAGCGGCATC GCCCCGTCAC ACGTGGATCA CATCGTGCTC
GGCAACGTAA TTCCGACGGA ACCGCGCGAC GCCTATCTGT CGAGAATCGC CGCCCTGGAA
GCCGGTATTC CAGCGCAAAC GCCCGCGTTA AATGTCAACC GCCTGTGCGG GTCGGGGTTG
CAGGCGATCA TCCTGGCAGC ACAGTCTCTC CTTCTCGGCG ACGCACAGGT TGCAATTGGT
GCTGGAGCCG AATCAATGAG CCGGGGCCCC TATCTGCTGC CGGCCCTGCG ATGGGGAGCC
AGAACGGGTG ACGTGCAGGC CGCAGACTAT ATGCTTGGTA TCCTGCATGA CCCGTTGCAC
CGTATTCACA TGGGCGTTAC CGCCGAGAAC GTGGCCGAGC GGGAAGCCAT TACCCGCGAG
ATGCAGGACG TACTGGCTGT GGAAAGCCAG CGTCGCGCTG CGCACGCAAT CGCTGAAGGT
TACTTCCGGT CGCAGATCAT CCCGGTGGAA ATACCTTCGC GCAAAGGCAT CGTGATATTC
GACAACGATG AGCACGTGCG CCCTGAGACC ACATTCGAGC AACTGTCGAC GATGAAGCCA
GCCTTTAAGC ATGACGGGAC GGTCACTGCT GGCAATTCCT CTGGCATCAA CGATGGAGCC
GCCGCGGTTG TTCTCGCCAC CGGTAACGCA GTAAAGGACC ATGGGTTGAA GCCGCTGGCG
AGGCTTGTCA GTTATGGGCA CGCGGGAGTC GATCCGCGGT TGATGGGGCT CGGCCCCATA
CCTGCTACCC ATCTTGCCCT GCAGCGCGCA GGACTTACGA CCGGACAACT GGACGTCATC
GAATCAAACG AGGCGTTTGC AGCCCAAGCC TGCGCAGTCA CCCAGGCGCT CGATCTCGAT
CCGAAAAAGG TCAATCCCAA CGGCTCCGGA ATCTCGCTGG GCCACCCGGT AGGTGCAACC
GGCGCGATCA TCACCACCAA GGCAATCTTC GAGTTACACC GTACGGGCGG CAAATATGCG
CTCGTCACGA TGTGCATCGG CGGAGGGCAA GGCATTGCTG CAATCTTCGA ACGGACGGGA
CCATGA
|
|---|
| Protein sequence | MGRSPLTSFE RPLVQTPTPE REFSVTGNTD IFVVAAARTA IGTFGGSLKD VPLAQLAILA
VRGTLERSGI APSHVDHIVL GNVIPTEPRD AYLSRIAALE AGIPAQTPAL NVNRLCGSGL
QAIILAAQSL LLGDAQVAIG AGAESMSRGP YLLPALRWGA RTGDVQAADY MLGILHDPLH
RIHMGVTAEN VAEREAITRE MQDVLAVESQ RRAAHAIAEG YFRSQIIPVE IPSRKGIVIF
DNDEHVRPET TFEQLSTMKP AFKHDGTVTA GNSSGINDGA AAVVLATGNA VKDHGLKPLA
RLVSYGHAGV DPRLMGLGPI PATHLALQRA GLTTGQLDVI ESNEAFAAQA CAVTQALDLD
PKKVNPNGSG ISLGHPVGAT GAIITTKAIF ELHRTGGKYA LVTMCIGGGQ GIAAIFERTG
P
|
|---|
| |