Gene Bxe_C0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0175 
Symbol 
ID4009723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp193130 
End bp194698 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content65% 
IMG OID637952830 
Productputative NADH-ubiquinone oxidoreductase subunit 
Protein accessionYP_555450 
Protein GI91780243 
COG category[C] Energy production and conversion 
COG ID[COG3261] Ni,Fe-hydrogenase III large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCA ATGCATTCGG GTTTCCCGGC CTGGTCCGCC TGTCCGCGTT TGCGGGCAAG 
TCTTCGGCAT TTCGCGCGCG CGTCGATGCG CACACGTGGA CCCGCACCGC CGGCACCGTG
CGCGACGCGG GCGGCCGTCT GATCTCCGTG TGGGGTACGG AAGAGGCGGC GGACCGATTC
GTCATCTCTG CCGCCTACGC ATTGGAAGAT GGCATCTTGT GGCTTCAGTT GCCCGCGGAT
GATCGGCATG AGAGCGGCGG CTACGGCTAC CCGGATCTGT CGGCCGTCTT TCCATGCGCA
ACGCGCATGC AGCGCGCCGT GTACGATCTG CTGGGACTGC GTGCGATCGG CGCCGAAGAT
ACGAGGCCGT GGCTGAATCA TGGCAACTGG GCCGCCGATT ACCATCCGCT GCGCAAGCGT
TCTTCCGGGA CCGAGCGGTT CGAGCCGTCG CAGGACGCGG ATTACCCGTT CGTGCCGGTC
GCGGGCGACG GCGTCCATGA GATCGCCGTC GGTCCGATCC ACGCAGGCGT GATCGAGCCG
GGACACTTCC GCTTCTCGGT GGTCGGTGAA AAAGTGCTGC GGCTCGAAGA GCGGCTGGGT
TATGCGCACA GAGGCATCGA AAAACTGTTC CAACGCACGC CCTGGTTGCT CGGGCAACGT
CTGGCGGCGC GCATCGCCGG GGATTCCACG GTCGCGTTCT CGTGGGCATA CTGCATGGCG
GTCGAACGGG CGTTCGAGGT GCGGATTCCG CCACGCGCGC AGTGGCTGCG GGCGCTGCTG
CTCGAGCGTG AGCGCATTGC CAACCACCTT GGCGATCTGG GTGCGCTCGG CAACGATGCC
GGCTTCGCCT ACGGCCTGGC CGCGTTTTCT CGCCTGAAGG AAGACTGGCT GCGCGTGAAC
GATCAGTGCT TCGGACACCG CTATCTGATG GACCGGATTG CTCCGGGAGG CATGGCGACG
GACCTCGATC CGCGCTGCAT CCCCGCGATG CTGACTCAGT GCGAGCAGAT CGACGCCGAG
GTCCGCGCGA TGCAAGCCAT TTACGACGAT CAGTCCGGGC TGCAGGACCG CTTCGCTGGC
GCGGGCATTG TTTCGGCGAA GGTGGCGGAG CACTTTGGCG TGTGCGGACT GGTCGGGCGC
GCCAGTGGAA GGAAAATCGA CGTGCGCGTC GATCACCCGT ACGCGCCCTA CCACGAGGTT
CAGGTCCGGG CGGTCAGCGA TGACCGCGGC GACGTGGCAG CCCGCGTCGC GGTGCGTTTC
AACGAGATCT ACGAATCGCT CCGGTTGCTC CGGGCTCTCC TGTCCGACCT GCCGGGCGGC
CACGTCGTCA CGCCGGTTGA ACACGCCGGC GCGCCATCCT GCGGAGTGGG TTGGATCGAG
GGCTGGCGGG GCGATGTGTT CATCGCAGTC GAGACCGGGG CCGACGGGAC CCTTTTGCGC
TGTCACTGCC ATGATCCGTC GTGGCACAAC TGGCCTGCCC TGGAGCACGC GATCATCGGC
AATATCGTTG CCGATTTTCC GCTGATCAAC AAATCATTCA ATCTGAACTA CGCGGGACAC
GACCTGTAA
 
Protein sequence
MRINAFGFPG LVRLSAFAGK SSAFRARVDA HTWTRTAGTV RDAGGRLISV WGTEEAADRF 
VISAAYALED GILWLQLPAD DRHESGGYGY PDLSAVFPCA TRMQRAVYDL LGLRAIGAED
TRPWLNHGNW AADYHPLRKR SSGTERFEPS QDADYPFVPV AGDGVHEIAV GPIHAGVIEP
GHFRFSVVGE KVLRLEERLG YAHRGIEKLF QRTPWLLGQR LAARIAGDST VAFSWAYCMA
VERAFEVRIP PRAQWLRALL LERERIANHL GDLGALGNDA GFAYGLAAFS RLKEDWLRVN
DQCFGHRYLM DRIAPGGMAT DLDPRCIPAM LTQCEQIDAE VRAMQAIYDD QSGLQDRFAG
AGIVSAKVAE HFGVCGLVGR ASGRKIDVRV DHPYAPYHEV QVRAVSDDRG DVAARVAVRF
NEIYESLRLL RALLSDLPGG HVVTPVEHAG APSCGVGWIE GWRGDVFIAV ETGADGTLLR
CHCHDPSWHN WPALEHAIIG NIVADFPLIN KSFNLNYAGH DL