| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C0087 |
|---|
| Symbol | |
|---|
| ID | 4009752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 97921 |
|---|
| End bp | 98943 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637952743 |
|---|
| Product | ABC taurine transporter, periplasmic ligand binding protein |
|---|
| Protein accession | YP_555363 |
|---|
| Protein GI | 91780156 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4521] ABC-type taurine transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01729] taurine ABC transporter, periplasmic binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.191531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.368778 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAC TACTCTCCTC GCTGCGAACC GCCGCTGCCG GCCTCACCCT CTTCACCCTG
ATGGCCGGCG CGGTGCACGC CGAGTCACGC GAAGTCGTGA TCGGCTACCA GGACATGGTG
GTTCCATGGC GCTACGCGCA GGTGAGCGGT GCAGTCGAAA AAGCGACCGG CTACAAGGTG
ACCTACCGCA AGCTCGCGGG CGGCGCCGAC GTGATCCGCG CGCTCGCGTC GGGCTCGATC
CAGCTCGGCG AGGCCGGCTC AAGCCCCATC GCGGCAGGGC TGTCGCAAGG CGTGGACATT
TCGCTGTTCT GGATTCTCGA CAACATCAAC GACGCCGAAG CGCTAGTGGC AAGAAACGGC
TCCGGCGTGA CGAAGCTGAC CGATCTCAAG GGCCGGAAGA TCGGCTTGCC ATTCGTGTCG
ACTTCGCATT TCCATGCGCT CGTCGCACTG CAAGATGCCG GGGTGGATCC GTCGACGGTC
AAGATCCTCA ACCTGCGCCC GCCAGAAGTC GCGGCGGCGT GGGAGCGCGG CGACATCGAC
GCGACCTACA TCTGGGACCC GGTACTCGCG AAGGTGAAGA AGAACGGCAA GGTGCTGATC
ACGTCAGGTG AAGTCGCACG GGAATCGGGC AAGGCGACCT TCGACGGCTT CGCGGTGAAT
CGCAAATTTG CGCAGGACAA CGGCGCGTTT CTCGTCGGTC TCGTCAAGGT ACTGGCCGAC
ACGGATGCCC AGTATCGCGA TCACAAAGCC GCGTGGACGG TGGGGTCGAA GGAAGTCGAG
GGCGTGGCGC AGGAATCGGG CGCGAATGCC GCCGACGTCC CCGCAAGCCT CGCACTCTAC
GCGTTCCCGA CCCTTGCGGA ACAGGCGTCG CCGACCTGGC TTGGCGGCGG AGCGCAAAGC
GGCGCCGCGA AGTCTCTGGC CGCGACGGCG GCGTTCCTCA AGTCGCAGGG CACGATCCAG
AACGTGTTGC CTGACTATTC GGCGGGCGTC GATCCCCGCT TCGTGCAGCA AGCGGCAAAA
TGA
|
|---|
| Protein sequence | MKPLLSSLRT AAAGLTLFTL MAGAVHAESR EVVIGYQDMV VPWRYAQVSG AVEKATGYKV
TYRKLAGGAD VIRALASGSI QLGEAGSSPI AAGLSQGVDI SLFWILDNIN DAEALVARNG
SGVTKLTDLK GRKIGLPFVS TSHFHALVAL QDAGVDPSTV KILNLRPPEV AAAWERGDID
ATYIWDPVLA KVKKNGKVLI TSGEVARESG KATFDGFAVN RKFAQDNGAF LVGLVKVLAD
TDAQYRDHKA AWTVGSKEVE GVAQESGANA ADVPASLALY AFPTLAEQAS PTWLGGGAQS
GAAKSLAATA AFLKSQGTIQ NVLPDYSAGV DPRFVQQAAK
|
|---|
| |