Gene Bxe_C0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0056 
SymboleutB 
ID4009603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp63364 
End bp64398 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content67% 
IMG OID637952713 
Productthreonine dehydratase 
Protein accessionYP_555333 
Protein GI91780126 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR02991] ectoine utilization protein EutB 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00751641 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGTTC CTTCGCTGGC CGATCTATCG TTAGCCGATG TCTACCGCGC ACGCCGCCGT 
ATCGAGGGGC GTGTGCGCCA TGCGCCGCTC GTCGAATCGC AGAGCCTGTC GGCGCTCGCG
GGCGTGCCGG TGTTTCTCAA ACTCGAAACC GTGCAGCCGA CTGGCAGCTT CAAGGTGCGC
GGCGCGACAA ACGCGCTCGG TCATCTCGCC GAACAGGGCT GCCGGAAAGT CGTGACCGCG
TCGACGGGCA ATCACGGGCG CGCGGTTGCG CATGCGGCCC GCACGCTCGG TATCGACGCG
ACGGTCTGCA TGTCGGCGCT CGTGCCGGCC AATAAGGTCG ACGCGGTGCG CGCGCTCGGC
GCGCACGTGC GGATTGTCGG CAAAAGCCAG GACGAGGCCG AGCACGATGC GTTGAGACTG
GTACGCGAAG AAGGCTTCGC TTATGTTCCG CCGTTCGACG ATCCCCATGT GATCGCCGGT
CAGGCGACGA TCGGTCTGGA AATCGTCGAG GCGTTGCCGG ATGTAGCCAA CATCGTCGTG
CCGCTATCGG GCGGCGGCCT GTTCGCGGGC GTCGCGTTCG CCGCCAGAAG CGCGAATCGC
GCGATCGGCC TGACCGGCGT GACGATGGCG CGCGGTGCGG CGATGCATGC CAGTCTGGTG
GCCGGCCAGC CGGTGCTGGT CGAAGAAGTG GCAACGCTCG CCGATTCGCT CGGCGGCGGC
ATCGGGCTGG AAAACCGCTA CACGTATGCG CTCACGCGCG ATCTGATCGA CCAGACCGTG
CTGCTCGATG AGGCCTCGAT CGCGCGCGGC ATCGCGCATG CGTACCGGCA TGAACGGCTC
GTCGTGGAAG GCGCGGCGGC GGTGGGCATT GCCGCGTTGC TCGATGGCGT GCTGCCCGCC
GGACGTATCG GGCGCGGGCC GCTCGTGCTC ATCGTGACCG GCGCCAACAT CGATATGGAC
CTGCATCGGC GGATCGTCGA TGCGGATTCC ATGCAACCCG ACTCGACGCA ATCCGGTTTA
CATCCCATCT CATGA
 
Protein sequence
MSVPSLADLS LADVYRARRR IEGRVRHAPL VESQSLSALA GVPVFLKLET VQPTGSFKVR 
GATNALGHLA EQGCRKVVTA STGNHGRAVA HAARTLGIDA TVCMSALVPA NKVDAVRALG
AHVRIVGKSQ DEAEHDALRL VREEGFAYVP PFDDPHVIAG QATIGLEIVE ALPDVANIVV
PLSGGGLFAG VAFAARSANR AIGLTGVTMA RGAAMHASLV AGQPVLVEEV ATLADSLGGG
IGLENRYTYA LTRDLIDQTV LLDEASIARG IAHAYRHERL VVEGAAAVGI AALLDGVLPA
GRIGRGPLVL IVTGANIDMD LHRRIVDADS MQPDSTQSGL HPIS