Gene Bxe_C0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0021 
Symbol 
ID4009530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp27563 
End bp28561 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content57% 
IMG OID637952678 
Productputative integrase 
Protein accessionYP_555298 
Protein GI91780091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.468061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAA TCCATCCCCA GGCTCGAACG ACCCCTGTGG TACGAGCAGA AATCGCACGA 
TCCACGGAAC CAACGAGCGT CGTCGCCAGG CGCTACGGCA TCAGCGCTGA GACAGTGCGC
AAATGGCGTA AGCGCGGTGA GCAGGCATGC CAGGACCGAT CGAGCAGACC CAAACGCCTG
CGATGGCGTG CTAGTGAGGA GGAACGCGCC ATCATCTGTG CGGTGCGGCG TGCTACGGGC
TTCCCCCTTG ACGACCTGGG CTTCGTGCTG GGCCATTTCC TGCCGCATCT CAATCGCGAC
AGCATCTACC GCGTGCTGAA ATCTGAAGGC CTCAACCGGC GCCCTCCAAA GCCGACGTCA
CTTCCTGAGA AAGGTCAGGG GCGCTTCAAG GAATACGATC TCGGCTACGT CCATATCGAC
GTCAAACACT TGCCAAAGCT GCGCACCGCT GACGGCGAGG TGCGCAAGCG CTACCTCTAT
GTCGCCATCG ATCGCTGCTC TCGCTTTGTG CACCTCGCCG TTTACGACGC CGAAAATACA
ACCAATGCAA TCGCCTTCCT GGCACAAGCG CGAAAGGCCT TTCCCTTCCG CATCACCCAT
GTGCTGACGG ATCGCGGATC CTGTTTCACC GCTGATGACT TCGAGCGCGC CTGCGCGAAA
CTCAAAGTCA CCCGTCGCGT AACCAAACCC TATACGCCAC AAACTAATGG CATGGTCGAG
CGCTTCAACG GCCGCGTCGC AAGCGAAGTC CTTGGCATCA ACATTGCCGG CCATGCAGAT
CTTGAAGTCT TGTTGAAAAG CTTCAACCGT GCCTACAATC GACGACGACA GCGAGTCCTT
AAAGGAAGCT CACCCATCGA CAAAGTCGAC CAACGTCTCA AGCTGAACGG ATGCCTTGCC
AACCCGCTCT ACAAGCCCCC AGCAGACCAG GAATACCTTC TATCTAAAGT AGACCGAATC
TTGGTTTACG CCAATGAGGT CTCGCAACCA GACAGGTAA
 
Protein sequence
MMQIHPQART TPVVRAEIAR STEPTSVVAR RYGISAETVR KWRKRGEQAC QDRSSRPKRL 
RWRASEEERA IICAVRRATG FPLDDLGFVL GHFLPHLNRD SIYRVLKSEG LNRRPPKPTS
LPEKGQGRFK EYDLGYVHID VKHLPKLRTA DGEVRKRYLY VAIDRCSRFV HLAVYDAENT
TNAIAFLAQA RKAFPFRITH VLTDRGSCFT ADDFERACAK LKVTRRVTKP YTPQTNGMVE
RFNGRVASEV LGINIAGHAD LEVLLKSFNR AYNRRRQRVL KGSSPIDKVD QRLKLNGCLA
NPLYKPPADQ EYLLSKVDRI LVYANEVSQP DR