Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C0008 |
Symbol | |
ID | 4009517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | + |
Start bp | 9459 |
End bp | 10556 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637952666 |
Product | OmpC family outer membrane porin |
Protein accession | YP_555286 |
Protein GI | 91780079 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC TCATATTCGG GGCGAGCGTC GCATTGATGT GCTCAGGTGC GTACGCGCAA TCGAGTGTCA CCTTGTATGG TTTGATCGAC GAAGCCATAC GTTTTCAGAC CTCTGGCTCG GGCAATACGC TCGGCATGAA CGAAGGAGCG ATCAACGGCA ACCGTTTCGG CCTGAAAGGC AAGGAAGATC TGGGTGGCGG CTCGTATGCG ATCTTCCAGC TCGAATCCGG GTTTAACGTC GCTAACGGCA AGTTCGACCA GCAATCGCAA CTATTCGGCC GCTTTGCGTG GGTGGGATTG CAAAACGACA CCTACGGCAC GCTGAAGGCT GGCCGCCAGT ATGGTGGCAT CTATAACTTC TACGCATTCA ATTTTGATCC AATCGGCGGC GGCAACATCA ACGCTACCGA CTGGTCTCTC TTCCTTACCG GAATCCGCTT CGACAATACG GTCGAATACG ACAATCGCTT CGGCCCGGTG GCGCTGCAGG TTCAGCACTC GTTCGGCGGA CAGGCAGGCA GTGCCTCGAG CGGCAGCACC ACGACGGCGT CGCTGATCTA CAACTTCAAT GGCGGCAAGG TGGGGGTTGA CGGCGCCGAA TCGAAAGACG GGACGGGTCA CAAACTGCTG GTCGGCTCGG CGGGCGGCAC GTACGCGTGG GGCCCGGTGG GCCTGTATCT ATACGGGATC AATGCACGCC GCGATGCCGG CTTCTCGGTG GCGGCCACCA ACAGCGGCCT GCCACTGTCG AATACGAACC TCATCAGCAA CGCAACCACG GCGTTCGGTC CGCAAACGAA GGCTCGCGAC GACATGTTCG TCCGTGCGGG CGTGACGTAT CAGGCTGCCC CGCAATGGAA GTTGACCGCC TCGTATGCGT ACGACCATGC GAACAATGTC GCACCAGGGC AGAACGGCAC GATCCAGACG GTCTACGGCA TCGTCGACTA TCTGCTGAGC AAGCGGACTG ACGTCTACCT CGAGGTGGAC CACAGCCACC TGGCCGGCGC GTCGATCGAC GATCCGAACG GTCCGCTGAC ATTCGGCGGG AAGGCGAACA ACTTCGGCGC GGGCTTGAGT CTGCGCACGC TGTTCTAG
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Protein sequence | MKKLIFGASV ALMCSGAYAQ SSVTLYGLID EAIRFQTSGS GNTLGMNEGA INGNRFGLKG KEDLGGGSYA IFQLESGFNV ANGKFDQQSQ LFGRFAWVGL QNDTYGTLKA GRQYGGIYNF YAFNFDPIGG GNINATDWSL FLTGIRFDNT VEYDNRFGPV ALQVQHSFGG QAGSASSGST TTASLIYNFN GGKVGVDGAE SKDGTGHKLL VGSAGGTYAW GPVGLYLYGI NARRDAGFSV AATNSGLPLS NTNLISNATT AFGPQTKARD DMFVRAGVTY QAAPQWKLTA SYAYDHANNV APGQNGTIQT VYGIVDYLLS KRTDVYLEVD HSHLAGASID DPNGPLTFGG KANNFGAGLS LRTLF
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