Gene Bxe_C0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C0005 
Symbol 
ID4009812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp6440 
End bp7225 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content64% 
IMG OID637952663 
Producthypothetical protein 
Protein accessionYP_555283 
Protein GI91780076 
COG category[S] Function unknown 
COG ID[COG3819] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.670577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCCG CAGTGAATCT ATACCCGCTG TTCGGCGTCG TGGTGATTGT CGCCGGTTTT 
CTGCTGCGCT TTAATCCCAT GCTGATCGTG ACCGTCGCGG CTATCATTAC CGGCCTCGCC
GCGCACTTTC CGGTTGACCG GATCCTCATC GCCATCGGTA GCGGTTTCGT GAAGACACGC
GTGATCCCGC TGATTATCCT GTTTCCGCTT GCCGTGATCG GGTTGCTTGA ACGGCACGGG
CTGCGTGAAC GGGCCCAGAC ATGGATCGGC GGCATCCGTG CCGCGACCCC GGGACGTCTG
CTAATTGCGT ATCTTTTCGT TCGCGAGATC ACGGCGGCGC TCGGCTTGAC CGGGCTCGGC
GGTCATCCGC AGATGGTCCG GCCGCTCGTT GCGCCTATGG CCGAGGGTGC GGCGCTGGCA
CGCTTCGGAA AGTTACGCGA CCCCGCTCGT TTCCGGCTGC GAGCGTTCGC TGCCGCCACG
GATAACGTCG GCCTGTTTTT CGGCGAGGAC ATTTTCGTCG CATTCGGCGC TATCGTGCTG
ATGGTGACGT TCCTGAAGGA AACAGGCATT GTCGTCGAGC CGATGCGCGT CGCGCTGTGG
GGCATGCCGA CCGCACTCGC CGCGTTCCTT GTGCACAGTT TCCGGCTGTA CCGGCTCGAC
GGCTGGCTAG GTCGCCACGC GGCGGCAGAT GAAGACGCGG CCAGCGCAAA TGAGCCTTCG
GTGGATGCGC CCGGCAACCC GCGCCGCGAC GGCGTGGTCG GCGCGGGACA AGGAGAACAG
GCATGA
 
Protein sequence
MQSAVNLYPL FGVVVIVAGF LLRFNPMLIV TVAAIITGLA AHFPVDRILI AIGSGFVKTR 
VIPLIILFPL AVIGLLERHG LRERAQTWIG GIRAATPGRL LIAYLFVREI TAALGLTGLG
GHPQMVRPLV APMAEGAALA RFGKLRDPAR FRLRAFAAAT DNVGLFFGED IFVAFGAIVL
MVTFLKETGI VVEPMRVALW GMPTALAAFL VHSFRLYRLD GWLGRHAAAD EDAASANEPS
VDAPGNPRRD GVVGAGQGEQ A