Gene Bxe_B3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B3004 
Symbol 
ID4006845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp26152 
End bp27111 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content66% 
IMG OID637949707 
Producttranscriptional regulator 
Protein accessionYP_552343 
Protein GI91777135 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.000291789 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCG TTGCGATCGC CATCTTTCCC GGGGTGCAGG CGCTCGACGT CGCCGGTCCC 
GTCGACGTGT TTTCCGAAGC CAACCGCTTC ATCGCGCCCA ACAATCGTTA CGAGGTCACG
CTGCTTGGCG CGGAATCCAC ACCATTGCGG GCGTCCAATG GCATGACGCT GGTCGCCGAC
GCCACTTTCA GCGAAGCGCG TCACACGTTC GATCTCGCGC TCATCGCGGG CGGCCCGGCG
CTGCCCGAAC GGGCGCCGGA TGCACGCGTG CTGGATTGGC TGGCGAACGC CGCCAGCCAA
TGCGGCCGTT ACGGTTCCAT CTGCACCGGC GCATTCGCGC TCGGCCACGC GGGCTTGCTC
GACGGCCACA ACGTCACCAC GCACTGGCAG CATGCGGCGC AACTGGCGGC GCAATTCCCC
AACGCACGCG TCGATTTCGA CCGTATCTAT CTGCGCGACG GACCACTCGT GACGTCAGCG
GGCGTAACGG CCGGCATCGA TCTGTCGCTT GCTCTGGTCG CCGAAGATCA TGGGCCGCAG
ATCGCGCTCG CGGTAGCCAA ACGCCTGGTG GTGTTCGCGC AGCGGCAAGG CGGTCAGTCG
CAATTCAGCC CCTACCTGAC GGCACCCGCC GACGAGACGT CGCCGGTCGC CAAAGTCCAG
GCGCACGTCA TGGAACGGAT TCGCGAGAGC TTCACGGTGA AGCAGCTGGC CGATGTCGCA
GGTATGAGCG CGCGCAACTT CGCGCGGGTG TTCGTGCAGG AGACCGGCGT AACGCCGCAT
GAATTCGTCG AACGTGCCCG TGTGGACGCC GCACGCAAGC TGCTTGAGAG CAGCGGCGCG
GCGCTGAAGG CGATCGCGTA CGACTGCGGC TTCGGCACGG CGGACCGCAT GCGCATTGTC
TTCACCAAAC GGATCGGCGC GACGCCCATG CAGTACCGGG AACGCTTTCG GTCGCCGTGA
 
Protein sequence
MPTVAIAIFP GVQALDVAGP VDVFSEANRF IAPNNRYEVT LLGAESTPLR ASNGMTLVAD 
ATFSEARHTF DLALIAGGPA LPERAPDARV LDWLANAASQ CGRYGSICTG AFALGHAGLL
DGHNVTTHWQ HAAQLAAQFP NARVDFDRIY LRDGPLVTSA GVTAGIDLSL ALVAEDHGPQ
IALAVAKRLV VFAQRQGGQS QFSPYLTAPA DETSPVAKVQ AHVMERIRES FTVKQLADVA
GMSARNFARV FVQETGVTPH EFVERARVDA ARKLLESSGA ALKAIAYDCG FGTADRMRIV
FTKRIGATPM QYRERFRSP