| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2920 |
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| Symbol | |
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| ID | 4006832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 121307 |
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| End bp | 123094 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637949789 |
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| Product | putative type II and III secretion system outermembrane protein, secretin |
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| Protein accession | YP_552425 |
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| Protein GI | 91777217 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCA AAAACAATGC AGCGCCATTG CGCCGCCGGG TCCTGCCATC CGTCCTCGTC
GGCATGTTGT TGTGCGAGGC CGCGCCGGCA GCGCTGGCAC AAACCGCGCA AGCCGCTCAT
GCCGCTTACA CCGCGGCCAC GGACAGCCCG TCGGCGAGCA CCCGTGTGCT CGAAATGTTC
CGTGGCGAAG TGCGGATCCT GCACATTCCC GGCACCATCA AACGCATCGC CATCGGCAAC
GGCAAGCTGC TCACCGCGAA TGTGGTCGAC GGCAGCCTGA TGCTGCTCGG CGAACAGGAC
GGCATCACCT CGCTCGTGGT GTGGAACGAC AAGGGCATTG CGCTGCAAAC CACGGTGCGC
ATCGCCAAAG CGGAAGTCAA TGCTTCGCTG GAACAGTTGC GCGCCGTGCT CAGGTCCGTC
GCAGGGCTGC GCATCGACGC GATCGGTTCG AATATCGTGC TGTCCGGCGT CATCCACCGC
GACATGGCGG GCACCGTCAA GGCGGCCACG CAGGAGATGA AGAACGTGGT CGACACCACC
ACGTTCGACG AAGGCGACGC GCTGCGCAAG ACCGTCCACT TCAAGGTGCA GATCATGGAA
GTGACCCGCA CCGGCCAGCG CAATCTCGGC ATTGCCTGGG ACAGCGCATT CAGAGGTCCG
CAGATCGGCG GTGCCGCGAG CGTCGCAACG GGCGCCGCCA AAGCCATCAC GGCCGGCACG
AGCTACTTTC TCGCCGGCAT TGCTTCGAAC ATCACCTCGC AAATCAACTT CGCGGTAGAA
AACGGCGATG CGTATGTGCT CGCCGCGCCC GAACTCAATA CGAAGAGCGG CGGCACGGCG
AGTTTTCTGG CGGGCGGCCA GGTGCCGATT CCGCAGTCGG GCGCGCTCGG CACGACCAGC
ATCGAATACA AGGACTACGG CATCAAGCTG AGCATCGTTC CGGTTGTCGA TGCGAACAAC
ATCATCTCCG CGCATCTCAC CACGGAGATC AGTCAGATCG ACCCATCGGT GACGTATGCC
GGCATGCCGG GCTTCCTGAC TCGCAACACG AGTTCGGACA TCTCCATGCG GGCCGGCGAG
ACGCTCGCCA TTTCCGGACT GGTCAGCGCG GACGCGGCCA ACGATTCCAA TGGCATGCCA
TTTCTCAGCC AGGTGCCGAT CATCGGGCAG CTGTTCCGCT CGGACCGCTT CCGCGCGAAG
AAAAGCGATC TCGTGATTTT CGTGACGCCG GTCATTTCGG ATCCTGAACT TTCGCCCAAT
ACGGATTTGC TCGCGCGTGC CGACAAGCTC GATGAGAACT TCCGCAAGGA GTATGGCAAC
ACGGACCCGC TTGTCGCAGA CGAGGACAAG GCGAAGCACG TCACCACGCC GCGTCAGCCG
ATCGTGCCGA CGCCTGCGCT GCTTCCCACG CCGGTTCGCA GCACGCCGCA AGTGCCGGCC
GAGCCGCAGG CAAGCGCGCC GGTTGTGGCG GGTGCCGAAG GTCCGGCGAC CCCACTCGCG
GCGTCAGTTC AAACGCCAGC CTATGTTCCG GCCCAGATCC CGGCCCAGGC AGCGGCACCC
GTTTCCGCTC AAGCGCCGGC CCAGACGCAG GCCGCCGGCG CGCCGGCGCA ACTGCCGCCA
TCACCGCCGC CTGCCAGCAC GCCGCCGGCA GGTGTCGCCG AGGCGCTGCG CATGCTGAAC
GACCCGCAGC ATGCGCAAGC CATGCCGGCT CATGACCCGA TGCAACCCGC TTCGAACGGC
AAGGTGCCGC AGCAGCAAAT CGGCGTGCTC GGCACGTCGA ACAACTGA
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| Protein sequence | MKVKNNAAPL RRRVLPSVLV GMLLCEAAPA ALAQTAQAAH AAYTAATDSP SASTRVLEMF
RGEVRILHIP GTIKRIAIGN GKLLTANVVD GSLMLLGEQD GITSLVVWND KGIALQTTVR
IAKAEVNASL EQLRAVLRSV AGLRIDAIGS NIVLSGVIHR DMAGTVKAAT QEMKNVVDTT
TFDEGDALRK TVHFKVQIME VTRTGQRNLG IAWDSAFRGP QIGGAASVAT GAAKAITAGT
SYFLAGIASN ITSQINFAVE NGDAYVLAAP ELNTKSGGTA SFLAGGQVPI PQSGALGTTS
IEYKDYGIKL SIVPVVDANN IISAHLTTEI SQIDPSVTYA GMPGFLTRNT SSDISMRAGE
TLAISGLVSA DAANDSNGMP FLSQVPIIGQ LFRSDRFRAK KSDLVIFVTP VISDPELSPN
TDLLARADKL DENFRKEYGN TDPLVADEDK AKHVTTPRQP IVPTPALLPT PVRSTPQVPA
EPQASAPVVA GAEGPATPLA ASVQTPAYVP AQIPAQAAAP VSAQAPAQTQ AAGAPAQLPP
SPPPASTPPA GVAEALRMLN DPQHAQAMPA HDPMQPASNG KVPQQQIGVL GTSNN
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