| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2820 |
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| Symbol | |
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| ID | 4006581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 244486 |
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| End bp | 246528 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637949889 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_552525 |
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| Protein GI | 91777317 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAA AGCTGAACGA AGTACCCGTC GATGACGACG CAACCCAAAG CGAAGAAAAC
CCTGCGGCTG TTCCAGCCAA GGTGGAAAAG GCCAAGGCTC GCGACCGTCG GGCAAAGGAA
AAAGCGCTGC TGAAAGACGC TTTCGCGTCG TCACAGCCTG GCACGGTCGA GGAACTCGAG
GAGCGCCGCT CCAAACTGCG CGCGCTAATC AAGCTCGGCA AGGAGCGCGG CTTCCTCACG
TACGCAGAAA TCAACGACCA CCTTCCGGAC AACTTCACCG AGACCGAGGC GATCGAAGGC
ATCATCAGCA CGTTCAACGA CATGGGCGTG GCTGTGTACG AGCAGGCCCC GGACGCTGAA
ACACTGCTGC TGAACGACAA CGCGCCGGCG GCTTCTTCGG ACGACGAAGT GGAAGAGGAA
GCGGAAGTCG CGCTGTCCAC CGTCGACTCG GAATTCGGCC GCACCACAGA CCCGGTCCGC
ATGTACATGC GGGAAATGGG CACGGTCGAA CTGCTCACGC GCGAAGGCGA AATCGAAATC
GCCAAGCGGA TCGAAGATGG CCTGAAGCAC ATGGTGATGG CCATCTCCGC GTGCCCGACC
ACGATCGCCG ACATTCTGGC AATGGCCGAG CGCGTCGCGA ATGAGGAAAT TCGCATCGAC
GAACTGGTCG ACGGCCTGAT CGACGCCAAC GCGGAAGACG CGGACGGCTT CTCCGCGCAA
GAAGCGGAAG CGATCGAAAG CGAAGACGAA GAGGTCGAAG AGGACTCGGA AGAGGACGAG
GAAGAAGACG ACGGCACGGC GCAAGCCACG GCCAACGCCG CGCAGATGGA AGCGCTCAAG
CGTGCGTCGC TCGAAAAATT CGCGATGATC AGCGAATGGT TCGACAAGAT GCGTCGCGCG
TTCGAGAAAG AAGGCTACAA GTCCAAGTCG TATCTGAAGG CGCAGGAAAC GATCCAGAAC
GAGCTCATGA CGATCCGCTT TACCGCGCGC ACCGTCGAGC GTCTGTGCGA CACGCTGCGC
GCGCAGGTGG ACGAAGTGCG TCAGGTCGAG CGTCAGATTC TGCACACGGT AGTCGACAAG
TGCGGCATGC CGCGTGCGGA ATTCATTGCG CGTTTCCCGG GCAGCGAGAC GGATCTCGAG
TGGGCCGACA AGATCGTCGG TGAAGGTCAC GCGTATAGCG CGATCCTCAC GCGGAACATT
CCGGCTATTC GCGAACAGCA GCAGCGTCTG CTGGATCTGC AGGCGCGCGT CGTGCTGCCG
CTGAAGGACC TGAAGGAAAC CAACCGTCAG ATGGCGGCGG GCGAACTGAA GGCGCGTCAG
GCAAAGCGCG AGATGACCGA GGCGAACTTG CGTCTCGTGA TCTCGATCGC GAAGAAGTAC
ACGAACCGTG GTCTGCAGTT CCTCGACCTG ATTCAGGAAG GCAACATCGG CCTGATGAAG
GCAGTGGACA AGTTCGAATA TCGTCGCGGC TACAAGTTCT CCACGTATGC AACGTGGTGG
ATCCGTCAGG CCATTACGCG TTCGATCGCG GACCAGGCGC GCACGATCCG GATTCCGGTT
CACATGATCG AAACGATCAA CAAGATGAAC CGCATCTCGC GTCAGATCTT GCAGGAAACC
GGTCTCGAGC CGGATCCGGC AACGTTGGCC GAGAAGATGG AAATGCCGGA AGACAAGATC
CGCAAGATCA TGAAGATCGC GAAGGAACCG ATCTCGATGG AAACGCCGAT CGGTGACGAC
GACGATTCAC ATCTGGGCGA TTTCATCGAA GATAACAACA CGGTTGCGCC GGCCGACGCC
GCCTTGCACG CCAGCATGCG CGACGTCGTG AAAGACGTGC TCGACTCGCT GACGCCGCGT
GAAGCGAAGG TGCTGCGCAT GCGTTTCGGT ATTGAGATGA GCACCGATCA CACGCTCGAA
GAAGTCGGCA AGCAGTTCGA CGTGACGCGT GAACGGATCC GTCAGATCGA GGCAAAGGCG
CTGCGCAAGC TGCGCCACCC GAGCCGTTCG GACAAGCTGA AGTCGTTCCT CGAAGGGAAT
TGA
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| Protein sequence | MTKKLNEVPV DDDATQSEEN PAAVPAKVEK AKARDRRAKE KALLKDAFAS SQPGTVEELE
ERRSKLRALI KLGKERGFLT YAEINDHLPD NFTETEAIEG IISTFNDMGV AVYEQAPDAE
TLLLNDNAPA ASSDDEVEEE AEVALSTVDS EFGRTTDPVR MYMREMGTVE LLTREGEIEI
AKRIEDGLKH MVMAISACPT TIADILAMAE RVANEEIRID ELVDGLIDAN AEDADGFSAQ
EAEAIESEDE EVEEDSEEDE EEDDGTAQAT ANAAQMEALK RASLEKFAMI SEWFDKMRRA
FEKEGYKSKS YLKAQETIQN ELMTIRFTAR TVERLCDTLR AQVDEVRQVE RQILHTVVDK
CGMPRAEFIA RFPGSETDLE WADKIVGEGH AYSAILTRNI PAIREQQQRL LDLQARVVLP
LKDLKETNRQ MAAGELKARQ AKREMTEANL RLVISIAKKY TNRGLQFLDL IQEGNIGLMK
AVDKFEYRRG YKFSTYATWW IRQAITRSIA DQARTIRIPV HMIETINKMN RISRQILQET
GLEPDPATLA EKMEMPEDKI RKIMKIAKEP ISMETPIGDD DDSHLGDFIE DNNTVAPADA
ALHASMRDVV KDVLDSLTPR EAKVLRMRFG IEMSTDHTLE EVGKQFDVTR ERIRQIEAKA
LRKLRHPSRS DKLKSFLEGN
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