| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2542 |
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| Symbol | |
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| ID | 4006962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 576084 |
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| End bp | 576935 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637950170 |
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| Product | ABC spermidine/putrescine transporter, inner membrane subunit |
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| Protein accession | YP_552800 |
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| Protein GI | 91777592 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.40939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.246449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACA CTGCGGCCCA CGTGGGCAAA GACTTGGTCC AGCCCGAACC GAAGCGCCGC
GACCGGCGCG CGGCGCTGCG CGTGCTGGGT TCGGTCGGCG GCTGGTGCGG CTATCTGTTC
CTGCTGCTGC CGAGCCTCGT GATCGTGCCC ATCTCGTTTG GCGGCGGCAG CGAACTGACC
TTCCCGCCGC GGACCTTCTC GTTCTCGTTA TTCCAGCAGT TTTTTGCGGA TCCGGCGTGG
TGGGGCGCGT GCATGACGAG CGTGATGGTG GCGCTGCTCG CTTCGGCGAT CGCGATCGCC
GTGGGCGTGC CCGGCGCCTA TGCATTGGCG CGCGGACACT TTCCGGGCAA GCGGGTGCTC
GAAACCCTGG CGATCACGCC GATGCTCGTG CCGGTGGTCG TGCTCGGGCT CGGCATCTAC
AAGCAGTTCT CGGCGCTCGC GCTCGTCAAC ACGATAGGCG GACTCGCGCT GGCGCATGCG
GTACTGGTCG TGCCGTTCGT GATCATCGCG GTGGGCTCGG GGCTGCGTCA CGCGGACGCG
TCGCTCGAAG CCGTAGCGCT CGTCATGGGT GCGAGCCGCA CGCGCATCTT CTTTCAGGTG
GTGCTGCCGC AGATCCGCGC TTCGGTGGCG GTGAGCGTGC TGTTCGCTTT CCTGCTCTCG
TTCGACGAAG TGGTGGTCGC GTACTTCATC TCGGGGCCAC AGACCACGAC GCTGCCGGTC
AAGATGTACA GCGCGATTCG CTGGGAAGTG TCGCCGGTGC TCGCTGCGGT CTCGACGCTC
CTCACGCTGA TCTCGCTGCT GGTATGCCTC GGCATCATGA CCTTGCAGCG GCGTGATTCC
GACACCGAAT AA
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| Protein sequence | MMNTAAHVGK DLVQPEPKRR DRRAALRVLG SVGGWCGYLF LLLPSLVIVP ISFGGGSELT
FPPRTFSFSL FQQFFADPAW WGACMTSVMV ALLASAIAIA VGVPGAYALA RGHFPGKRVL
ETLAITPMLV PVVVLGLGIY KQFSALALVN TIGGLALAHA VLVVPFVIIA VGSGLRHADA
SLEAVALVMG ASRTRIFFQV VLPQIRASVA VSVLFAFLLS FDEVVVAYFI SGPQTTTLPV
KMYSAIRWEV SPVLAAVSTL LTLISLLVCL GIMTLQRRDS DTE
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