Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B2167 |
Symbol | pcaF |
ID | 4007337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 980474 |
End bp | 981676 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637950539 |
Product | beta-ketoadipyl CoA thiolase |
Protein accession | YP_553169 |
Protein GI | 91777961 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.34173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG CATTCCTCTG CGACGCGATT CGCACCCCCA TCGGCCGCTA TGCGGGAGCG CTGTCGTCGG TGCGTGCCGA CGACCTCGGC GCCGTGCCGC TCAAAGCGCT GATGGAGCGC AACAAAGAGG TCGACTGGAA CGCGATCGAC GACGTGATCT ACGGCTGCGC GAACCAGGCT GGCGAGGACA ACCGTAACGT CGCGCGCATG TCGCTGCTGC TGGCCGGCTT GCCGCAAGGC GTGCCGGGCA CGACGGTGAA TCGCCTGTGC GGCTCGGGCA TGGACGCGGT CGGCATTGCC GCGCGCGCCA TCAAATCGGG CGAGGCCGCG TTGATGGTGG CGGGCGGCGT GGAAAGCATG AGCCGCGCGC CGTTTGTGAC GGGTAAGGCG ACCAGCGCGT TCTCGCGCCA GGCCGAGATT TACGACACGA CCATCGGCTG GCGCTTCGTC AATCCGTTGA TGAAGAAACT GTACGGTGTC GATTCGATGC CGGAAACCGG CGAAAACGTC GCCACCGACT ACAACATCAG CCGCGCCGAT CAGGACGCTT TCGCGTTGCG CAGCCAGCAG AAGGCGGCGC GCGCGCAACG CGACGGCACG CTCGCGCAGG AGATCGTCGG CGTGACGATC GCGCAGAAGA AGGGCGATCC GGTCACCGTG TCGCAAGACG AGCATCCGCG CGAGACGAGT CTGGATGCGC TCGCCAAACT CAAGGGCGTG GTGCGTCCGG ACGGCACGGT CACGGCAGGC AATGCGTCGG GCGTGAACGA CGGCGCAGCG GCGCTGCTGC TTGCCAACGA GGAAACCGCC AGGCGCTTCG GCCTCACGCC GCGTGCTCGC GTGCTGGGTA TCGCGACGGC GGGCGTCGCG CCGCGCGTGA TGGGCATCGG CCCGGCGCCC GCCACGCAGA AACTGCTGGC GCGCCTGAAC ATGAGCCTCG ATCAATTCGA TGTGATCGAA CTGAACGAGG CGTTTGCTTC GCAAGGTATC GCGGTGCTGC GCGCACTCGG CGTGGCCGAC GACGACACTC GCGTGAATCC GAACGGCGGC GCGATCGCGC TCGGCCACCC GCTCGGCATG AGCGGCGCGC GTCTGGTGAC CACCGCGATG TATCAGTTGC ATCGCACGCA GGGCCGTTTT GCGCTGTGTA CGATGTGTAT CGGCGTCGGC CAGGGCATTG CGATCGCGAT TGAACGGGTG TGA
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Protein sequence | MTEAFLCDAI RTPIGRYAGA LSSVRADDLG AVPLKALMER NKEVDWNAID DVIYGCANQA GEDNRNVARM SLLLAGLPQG VPGTTVNRLC GSGMDAVGIA ARAIKSGEAA LMVAGGVESM SRAPFVTGKA TSAFSRQAEI YDTTIGWRFV NPLMKKLYGV DSMPETGENV ATDYNISRAD QDAFALRSQQ KAARAQRDGT LAQEIVGVTI AQKKGDPVTV SQDEHPRETS LDALAKLKGV VRPDGTVTAG NASGVNDGAA ALLLANEETA RRFGLTPRAR VLGIATAGVA PRVMGIGPAP ATQKLLARLN MSLDQFDVIE LNEAFASQGI AVLRALGVAD DDTRVNPNGG AIALGHPLGM SGARLVTTAM YQLHRTQGRF ALCTMCIGVG QGIAIAIERV
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