| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2097 |
|---|
| Symbol | |
|---|
| ID | 4007408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 1054956 |
|---|
| End bp | 1057637 |
|---|
| Gene Length | 2682 bp |
|---|
| Protein Length | 893 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637950610 |
|---|
| Product | calcium transporting P-type ATPase |
|---|
| Protein accession | YP_553240 |
|---|
| Protein GI | 91778032 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCTC GAGACATGCA GCATCCCGCA CCACCTGAGC AGCGCGCCTG GCATGCGGAG
ACGGCAGAGT CTACGATTGA ACGCTTCGGC ACCGACGCGA CAAGGGGACT CGATACCGCC
GAGGCGGCGC GTCGGCGCGC GGTCTACGGA CGTAACGAAA TCATCGAAAC GGAACGGCGT
CGGATCATCA CGATGCTGAT CGAGCAATTC AAGGATTTCA TGATCCTCGT TCTGCTCGCT
GCCGCAATCG TGTCGGGACT CGTCGGCGAC CTTGAAGACG CGCTCGTGAT CGTCACGATC
GTCGTATTGA ACGGAACGAT TGGCTTCTTT CAGGACTTTC GCGCCGAGCA CGCCATGGCG
GAACTCAAGC GGCTGGCCGC GTTTCACGCG TCGGTAGTCC GTGACGGACA CCCGTTGACG
ATTGCCGCCG CCGAAGTCGT TCCCGGAGAT ATCGTCCTTC TCGAAGCAGG CGGCGCCGTT
CCAGCCGACC TGAGAGTGAT CGAAGCACCC CAGTTAAGGG TCAGTGAAGC CACGTTGACG
GGCGAGGCCG CCCCCGTTGA CAAGCATCCG CAGCCGCTAA CAGGCGATGC GACGCTCCCC
ATCGCCGATC GCACCAACAT GGTCTACAAG GGCACTGTCG TGACCTATGG GCGGGCGCGC
GGCGTCGCAG TCGCAACGGG GATGAACACG GAACTCGGCA AGATCGCGGC GCTGCTGGAG
TCGGCTCCCG CATTGCAGAC CCCGCTGCAG CAGCGCCTGA GTCGATTCGG CAAGCAACTC
GCCATTGCCA TTCTCGCAAT CTGCGCGCTG ATATTCGTGT TCGGCGTATC GAGTGGAGAG
CCGCCAATAC TCATGTTGCT GACCGCACTG AGCCTTGCCG TCGCCGCCAT TCCAGAAGCA
TTGCCCGCCG TCGTCACGAT GATGCTCGCC CTCGGTGCGC GCAGCATGGC GCAGCGCGCT
GCGCTGGTCC GGCGCCTTCC CGCGGTGGAA ACGCTTGGCT CCGTAAGCTT CATCTGCACA
GACAAGACGG GCACGCTGAC ACTCAACGCA ATGCGCGTGG TCGAAGTATG TCCGGCGGGA
ACGCAGCGGC TGCAAACCGC GAACATGGGC GTCGACGATA TTACCGGGCA GCTGCTGCGG
GCCGTTTCGC TGTGCAACGA CGCGACGTAC GATGCATCCG GCAAGCTAGC CGGCGATCCC
ACTGAAGTGG CACTGTGGGA GGTCGCCGCG GACGCCGGCA TCGATCGCTC CGCTCTCGAC
AGATCGATGC CGCGCTGCAC GGAAATGCCG TTTGATTCCG TACGGAAACG CATGACCACC
GTGCATCGCG CTGAAGACTC ATTTATCGCG TATACCAAGG GCGCGCCTGA AACCGTGATT
GAACGGTGTA CGTCGGTTGT CGGACAGGAC GGCACGCCGT TCGACACGAC AACCTTGACG
TCGATGGCGG GTGCGATGGC GGCGGATGGA CTGCGTGTGC TTGCCGTGGC AATGCGCCGC
TGGCCGCAAA AGCCACCGGC CGACACCGAC GAACTCGAAT GCGACCTGAC GCTACTCGGC
TTTATCGGCA TGCTCGATCC ACCTCGCCCG GAGGCCGCGG GTGCCGTCGC ATTGTGCAGG
CAGGCCGGCA TCACTGTGGT GATGATTACG GGAGACCACC CGATCACCGC GTTGGCGATT
GCCAGGTCAG TGGGCATTGC CAGCGATGAA GCACAGGTGA TGACCGGGTA CACGCTGGGC
AAGCTGTCGG ACGAGGCACT GCTCGAAGCG ACACAGCGCA TCCGCGTCTA CGCAAGGGTG
GATCCCTCGC AGAAGATCCG CATCGTAAAG GCAATGCAGT CGACGGGGCA CTACGTGGCG
ATGACCGGCG ACGGCGTCAA CGATGCACCT GCCCTTGCGG CGGCAAACAT CGGCGTGGCG
ATGGGCAAAG TCGGCACTGA CGTCGCGCGC GAAGCGGCCA GCGTGGTCCT GCTCGACGAC
AATTTCGCAA CGATAGTCGC GGCAGTCCGT GAAGGCCGAC GGGTTTATGA CAACGTTCGC
AAATTCATCC GTTACGTATT GACCGGCAAT CTGGCGGAAC TCTGCGCCAT CGCGCTGGCA
CCGCTTTTTG GCCTTCCGAT CCCCCTGCTG CCAATCCAGA TCCTGTGGAT CAACCTGCTG
ACCGATGGCT TGCCGGGGCT TGCACTGGCC GCCGAGCCTG CCGAACCGAC CATCATGCAA
CGCCCGCCAA GGCCGCCCGA CGACAGTCTG TTCGCACATG GACTATGGCA GTACATCGTG
CGGATCGGCA TCGCGATAGC AGCCGTAACG ATGGGCACCC AATGGTTCGC GATGGGACTC
GACGACGCAC ACTGGCGCAC CATGACCTTC ACCGTGCTGG CCTTGTCCCA GATGGGGCAT
GTGCTCGCGA TCCGTTCCGG GCAGACCTCG ATCTTCACCC AGGGTTTGCT GTCGAACCGC
CCGCTCGCTG CCGCGGTTGC ACTGACTGTC GTGTTGCAGC TCGCCGCGAT CTACGTTCCC
GTGCTCAACA ACATCCTCGA TACCGCGCCG CTGAGCGCGC CGGAACTGGG TTTTTGCATC
CTCGTGTCCG CGCTGATCTT CGTTCTGGTG GAAACAGAAA AGTGGATCAT CCGTCGCCGG
TTAGCCAGCG TATCCGCAAC TGCAAGTTTT CCTAACCAAT GA
|
|---|
| Protein sequence | MNPRDMQHPA PPEQRAWHAE TAESTIERFG TDATRGLDTA EAARRRAVYG RNEIIETERR
RIITMLIEQF KDFMILVLLA AAIVSGLVGD LEDALVIVTI VVLNGTIGFF QDFRAEHAMA
ELKRLAAFHA SVVRDGHPLT IAAAEVVPGD IVLLEAGGAV PADLRVIEAP QLRVSEATLT
GEAAPVDKHP QPLTGDATLP IADRTNMVYK GTVVTYGRAR GVAVATGMNT ELGKIAALLE
SAPALQTPLQ QRLSRFGKQL AIAILAICAL IFVFGVSSGE PPILMLLTAL SLAVAAIPEA
LPAVVTMMLA LGARSMAQRA ALVRRLPAVE TLGSVSFICT DKTGTLTLNA MRVVEVCPAG
TQRLQTANMG VDDITGQLLR AVSLCNDATY DASGKLAGDP TEVALWEVAA DAGIDRSALD
RSMPRCTEMP FDSVRKRMTT VHRAEDSFIA YTKGAPETVI ERCTSVVGQD GTPFDTTTLT
SMAGAMAADG LRVLAVAMRR WPQKPPADTD ELECDLTLLG FIGMLDPPRP EAAGAVALCR
QAGITVVMIT GDHPITALAI ARSVGIASDE AQVMTGYTLG KLSDEALLEA TQRIRVYARV
DPSQKIRIVK AMQSTGHYVA MTGDGVNDAP ALAAANIGVA MGKVGTDVAR EAASVVLLDD
NFATIVAAVR EGRRVYDNVR KFIRYVLTGN LAELCAIALA PLFGLPIPLL PIQILWINLL
TDGLPGLALA AEPAEPTIMQ RPPRPPDDSL FAHGLWQYIV RIGIAIAAVT MGTQWFAMGL
DDAHWRTMTF TVLALSQMGH VLAIRSGQTS IFTQGLLSNR PLAAAVALTV VLQLAAIYVP
VLNNILDTAP LSAPELGFCI LVSALIFVLV ETEKWIIRRR LASVSATASF PNQ
|
|---|
| |