| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B2035 |
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| Symbol | |
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| ID | 4007469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 1127554 |
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| End bp | 1129926 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637950670 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_553300 |
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| Protein GI | 91778092 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0244946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGAG TGACCGGAAC CCGCCTGGTA TCTATCGATA TGCTTTCCAA CTCAATGCAG
CACCCGTCCG ATTCCGGTTT GCGCGATCGC TTTCACGTGC GCTCGCTCGA ACACCAGCGT
CCGCTTTCCA CGGTAACGAT GGCGTTTACC GTGGTCGCGT TCCTGTGTTT CATCGGGGCG
CGCAACCTGG TCGATGGCCC CGCTGCGCCG CTCGCCTACC GGCTCGGATG TGCACTGGTG
CTCGCGCTGC TCGTGCTGGC GATCCCGCGC GCAAAGTCGA CGTGGGTATT CGGGCTGATC
GGCGTGGCTT ACTCGCAGGT ACTGGTGGCG GGCCTTGCGC TGAACGTTGC CGGCGTCGCG
CAACCGCTGT TGTGGGTGCT GCCCGCGATG GTCGTGATAC CGGTCTGCGC CGCGCCGCTG
TGGCTTACGC CCACGCATTT CGTTGCCGGC AGCGCGCTGC TTTACGCCAC GGCGTACGCG
CTGCTGTTCG GCGCGCCGTT GACGCGCGAT GTCGAGATCG TGGTGTGGAT GTGGATCGCG
GCAATCGGCG TGCCGACTTC CGCCGTGTTC CATTTCGGCT TCTACCGGTT TCGCCGCAAC
CACTTTCTGC TCGAAAGCCA ACTCGCGCAA CTCGCGGCCA CCGACCCGCT AACCGGCCTG
CAAAACCGCC GTTCGTTCGT CAAGCAGGCT GAGCGCCGTC TCGACACGCT CGCGCCGGAG
ACGCGGATCA GCGCGATCTT TCTCGACATC GACAACTTCA AATCCCTGAA CGACCGCTTC
GGCCATGCGG TCGGCGACCA CGCGCTCTAC GAGGTGGCCC ACGCGTTGAT GGAAGAAGCC
TCCGCGGACG ACAGCGTGAG CCGCATCGGC GGCGAGGAAT TCGCGCTGCT GCTGTGCGAT
GGGCTCACCG GCGCGCTTCA TCTGGCCGAA CGGCTGCGCC TCGCGATCGC CGCGATCGAA
CGGCCGGACG GCCAGTTGAC CGCGAGCTTC GGCGTGGCCG AGCACCGCAG CGGCGAAAGC
ATCATGATGC TGCTCGACCG CGCCGACGAA GCCTTGCTGC GCGCCAAGCA CTCCGGCAGA
AACCGCGTGT GCGCCGAGCG CCCGCTGCCG CGCGACGCGT TGCAACTGCT GGTCGACGAC
GCCGCCGGCG AGGATGGCGC GGCGGTGCGG CGGCACCGAT GGGAGGATTA CTACCTGACC
TCGCATTTCC AGCCGCTCTA CAGCCTGTCG CATCAGAAGC AGGTGGGATT CGAGGCCTTG
CTGCGCGGCG AGCAGGGCGA CGGCACGCTG GTGCCGCCCG CGGTTCTGTT CGCGCCGAAG
CCCTCCAGCG ACGAAGGCGC GCTCGACCGC GCGAGTCACG CCGTGCATCT GGCCAATGCG
CGCGGGTCGC TGCCGGACGG CGCGTGGCTC TTCCTCAACA TTCTGCCGGC CACGTTCATC
GCCGAAGGTT ATGCGGATCA ACTGGCAAAG CTCGTGCGGG CCGTGGGACT CGAACCGGAA
CGGGTGATTC TGGAGATTCT CGAATCGCAC GGCGGCAGTG TCGACGACAT GTCGCGGGCG
GCGGCGTTGT ACCGCGAGCA CGGCTTCCTG ATCGCCGTCG ACGATTTCGG CGCGGGTCAG
TCGAATCTCG ACCGGTTGTT CCGGATTCGC CCGGACCTCG TCAAGCTCGA CGGCGAACTG
ATTCGCGCGA CGAGTCACGG CACCGAGCAG CCCATTCTGC CGAAGCTCGT TTCGCTGCTG
CATCAGGCGG GCATGCTGGT GGTGGTCGAA GGCGTGGAGA CCACCGAGGA ACTGATTCTC
GCCGTGGAAT CGAATGTGGA TTTCGCGCAG GGTTATCTGC TGGGCCGGCC GGCTGCGGAG
ATTGCGCCGC CGGAGTCGGT GCATCGGCGC ATCGACGATG CTTTCGATGT CATCGCGCAT
GGCCGCGCGC ATCAGCATGC GCTGTTCGAA TCCGAAGTGG AGCCTTACCG CGCAGCCTTG
CGGCTCGCCG CCGACGCGTT GCTGGCCGGC GTCGCCAAGG AAGTGGCGTT TGTGCCTCTC
GCAAGGTTCG ATCGCTGCAT CAGCTGTTTC ATTCTCGACG ACTCGGGCAG GCAGATCGGC
CAGGAAGTGC CGGGGCCGGC CTGGAGTAGC GACGGGGCCT CGCTGCAACC CGTGGCGAAT
CCACGCGATG CGCGCTGGGA TCATCGTCCG TATTTCCGCA ATGCGGTGCT GTTGCCGGGC
GTGGCGGTGG CGAGTAATCC TTATCTTTCG CTGGCGAGCG GCAGGCCTTG TATCGCAGTG
ACGCTGGCGG TGCAGTTTGC CGCCGGGCGC TGCGTGATCG GGGTGGAACT GGACTGGTCG
GCGTTGGGGC TGCCGTGGCC CGCGGGGGAG TAG
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| Protein sequence | MGRVTGTRLV SIDMLSNSMQ HPSDSGLRDR FHVRSLEHQR PLSTVTMAFT VVAFLCFIGA
RNLVDGPAAP LAYRLGCALV LALLVLAIPR AKSTWVFGLI GVAYSQVLVA GLALNVAGVA
QPLLWVLPAM VVIPVCAAPL WLTPTHFVAG SALLYATAYA LLFGAPLTRD VEIVVWMWIA
AIGVPTSAVF HFGFYRFRRN HFLLESQLAQ LAATDPLTGL QNRRSFVKQA ERRLDTLAPE
TRISAIFLDI DNFKSLNDRF GHAVGDHALY EVAHALMEEA SADDSVSRIG GEEFALLLCD
GLTGALHLAE RLRLAIAAIE RPDGQLTASF GVAEHRSGES IMMLLDRADE ALLRAKHSGR
NRVCAERPLP RDALQLLVDD AAGEDGAAVR RHRWEDYYLT SHFQPLYSLS HQKQVGFEAL
LRGEQGDGTL VPPAVLFAPK PSSDEGALDR ASHAVHLANA RGSLPDGAWL FLNILPATFI
AEGYADQLAK LVRAVGLEPE RVILEILESH GGSVDDMSRA AALYREHGFL IAVDDFGAGQ
SNLDRLFRIR PDLVKLDGEL IRATSHGTEQ PILPKLVSLL HQAGMLVVVE GVETTEELIL
AVESNVDFAQ GYLLGRPAAE IAPPESVHRR IDDAFDVIAH GRAHQHALFE SEVEPYRAAL
RLAADALLAG VAKEVAFVPL ARFDRCISCF ILDDSGRQIG QEVPGPAWSS DGASLQPVAN
PRDARWDHRP YFRNAVLLPG VAVASNPYLS LASGRPCIAV TLAVQFAAGR CVIGVELDWS
ALGLPWPAGE
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