Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1934 |
Symbol | |
ID | 4007568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 1232025 |
End bp | 1232549 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637950761 |
Product | hypothetical protein |
Protein accession | YP_553391 |
Protein GI | 91778183 |
COG category | [S] Function unknown |
COG ID | [COG2128] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.000792468 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.160018 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGTA TTCCCTATCC CGATCTGGGC GCGGCCGACG CCGGGCTCAT CGAGCGCATC GTCGCCGGGC GCGGCCGGCT GCTCAACCTT TATTCGATGC TGCTGCACAG CCCGCCCGTA TGCGAGGGGT GGCTGTCGTT TCTGACGGCG ATTCGCCAGA AATCCGCGCT TGAGGCACGG GTGCGCGAAC TGGTGATCAT GCGCATCGCG GTCGTCAACG CCGCCGACTA TGAGTTCGAG CAGCATCGTC CTATCGCTGT TTCGGTCGGC GTGACGCTAA GCGAGATCGA TGCATTGCGC ACCGACGATC TGGAAGCGTT CAGCGAAGGC GATCGCGCGG TTCTCAGGTA CTGCGACGCG ATGACGAAGA ACGTGCGTGT GCCGGACGAG ATCTTCTCCG CGGTGCGCAG GCACTTCAGC GACCGCGAGC TCGTCGAGTT GACGGCGACG GTGGGCGCTT ACAACCTGGT TTCGAGGTTT CTCGAAGCGC TTCGGATAGA CCATGACGAT GAGCGTGTTG CGTAG
|
Protein sequence | MARIPYPDLG AADAGLIERI VAGRGRLLNL YSMLLHSPPV CEGWLSFLTA IRQKSALEAR VRELVIMRIA VVNAADYEFE QHRPIAVSVG VTLSEIDALR TDDLEAFSEG DRAVLRYCDA MTKNVRVPDE IFSAVRRHFS DRELVELTAT VGAYNLVSRF LEALRIDHDD ERVA
|
| |