Gene Bxe_B1832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1832 
Symbol 
ID4007675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1340920 
End bp1342344 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content65% 
IMG OID637950861 
Productcarbohydrate porin 
Protein accessionYP_553486 
Protein GI91778278 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3659] Carbohydrate-selective porin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.325541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.378247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGCG CCGCGCTTTG CACGGCGTTC GCGTGGGCTT CGCTGACAGC CGGCGCGGCG 
ATGGCCGAAG CCAATCCCGA CGCCACACCG GAAGCGCCCG AGGCCGACCT GAAGATTCAG
GCGACCCAGA CGAACCAGTG GACCGGCTTC TGGAACCGAC AGCAGATGCT CGGCGACATT
GGCGGCCTGC GCCCCTGGCT CGGCAAATAC GGCGTGACCT TCACGCTCAC CGAAACCAGC
GAAGTGCTCG CCAACCTGCG CGGCGGTCTC GCGCATGGCG CCGACTACGA CGGCTTGACC
ACCGGCACCG TGCAACTGGA CACGCAAAAG GCATTCGGTC TGCCGGGAGG CCTGTTCAAC
GTCAGCGCCT TGCAGATCCA CGGCGCCAAT CTCAGCGCCA ACAAGCTCGG CACGCTGAAC
ACGGCGAGCG GCATCGAAGC GGACGACACC ACCCGCCTGT GGGAATTGTG GTACCAGCAG
TCGTTCCTGA ACAAGCGCAT CGACGTGAAG ATCGGTCAGC AAAGTATCGA CCAGGAATTC
ATCACCAGCA CGTATTCGGC GCTGTTCGTC AACACCATGT TCGGCTGGCC CGCCCTGCCC
TCGTATGACA TGCCGTCCGG CGGCCCGGCC TATCCGCTGT CCGACCTCGG CGTGCGCGTG
CGCGGCCAGA TCACGCCTTC ATTGACCGCG CTGGCCGGCG TATTCGACGG CGATCCGCTC
GGCAACAACC CGGACAACAA GAGCGGCACC AACTTCAACC TGCACAACGG CACACTGTTC
ATCGGCGAAT TGCAGTACGC GATCAACCAG CCGGCCGACG GCGAAATGGT CGGCGCGGGC
GGCGGCGGTT TGCCCGGCAC CTACAAGCTC GGTGTCTGGT ACAACAACGG CAGCTTCGCG
GATCAACGCT ACGACAACAC GGGCCTATCG CTCGCCAATC CGGCCACCAG CGGCATCGCC
CAGAATCATC ACGGCGACTA CAGCTTCTAC GCGGTGGCCG ACCAGATGAT CTGGCGTCCG
GACCCGGACG AACCGCGCAG CATCGGCGTA TTCGCGCGCG TGATGGGCGC GCCCGGCGAC
CGCAACCTGG TGAGCCTCGC CGCCAACCTC GGCGTGGTGA TGAAAGCGCC GTTCGCCGGC
CGCGACAACG ACAGCGTGGG TCTCGCGCTC ACCTACATCA AGGTCGGCAA CCACGTGAAC
GGCCTCGATC TGGATAGCCG CGCATTCAGC AACGGCCCAT ACGGCGTGCG CACCAGTGAA
ACCACGCTCG AGGCGACCTA TCAGTATCAG GTCAATCCGT GGTGGCAACT GCAAGCCGAC
GCGCAATACA CGTTCAACGC CGGCGCCGGC CAGAACCCGA ACGATCCGAC GCAGCCGCTG
CGCAACACGT TCGTCATCGG CCTGCGGACC AACATCAATT TCTGA
 
Protein sequence
MRRAALCTAF AWASLTAGAA MAEANPDATP EAPEADLKIQ ATQTNQWTGF WNRQQMLGDI 
GGLRPWLGKY GVTFTLTETS EVLANLRGGL AHGADYDGLT TGTVQLDTQK AFGLPGGLFN
VSALQIHGAN LSANKLGTLN TASGIEADDT TRLWELWYQQ SFLNKRIDVK IGQQSIDQEF
ITSTYSALFV NTMFGWPALP SYDMPSGGPA YPLSDLGVRV RGQITPSLTA LAGVFDGDPL
GNNPDNKSGT NFNLHNGTLF IGELQYAINQ PADGEMVGAG GGGLPGTYKL GVWYNNGSFA
DQRYDNTGLS LANPATSGIA QNHHGDYSFY AVADQMIWRP DPDEPRSIGV FARVMGAPGD
RNLVSLAANL GVVMKAPFAG RDNDSVGLAL TYIKVGNHVN GLDLDSRAFS NGPYGVRTSE
TTLEATYQYQ VNPWWQLQAD AQYTFNAGAG QNPNDPTQPL RNTFVIGLRT NINF