| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1798 |
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| Symbol | |
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| ID | 4007709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 1382511 |
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| End bp | 1383503 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637950895 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_553520 |
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| Protein GI | 91778312 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.135903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000287044 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAAGA AGTTTGCCTC TTCCCGTGTT TCGATGATCG TCGCAGCCTC GGTGCTGGCC
TTCAGCACCG TGTCGGCGCA TGCGCGGGTG TTCCGCGTGT CGGACGTGCA TGGCGACACG
TATCCGACCA ACATGGCCGT GAAATACATG GGAGAGCAGA TCAACAAGGC AACCGGCGGC
AAGGATTCCG TGAAGGTCTT CGGCAATAGC GCGCTGGGTT CGGAAAACGA CACCATCGAT
CAGGTGCGCA TCGGCGCATT GGACATGGCG CGCGCCAACG GCGCGGCTTT CAACGAGATC
GTTCCCGAAT CGATGATTCC GTCGCTGCCG TTCCTGTTCC GCGATATCGA CCATTTCCGC
AAAGTGATGT ACGGCCCGGA AGGCCAGAAG ATTCTCGACG CCTTCAAGGC GAAGGGCATG
ATCGCGCTGA CGTTCTACGA GAGCGGCGCG CGTTCGATCT ATACGAAGAA ACCGATTCAT
TCGCCCGCTG ACATGAAGGG CCTCAAGGTT CGTGTGCAGC CGTCCGACCT GATGGTCGAC
GAAATCAGGG CAATGGGCGG CACGCCCACG CCGATGCCGT TCGCCGAGGT CTACACGGGC
CTGAAGACGG GGCTGGTGGA TGCCGCTGAA AACAACCTGC CGTCGTACGA AGAAACCAAG
CACTTCGAAG TCGCGCCGGT CTATTCCGAA ACCCAGCATT CGATGACCCC CGAAGTGCTG
GTGTTCTCCA AGAAGGTGTG GGATACGCTG ACGCCGCAGG AACAGGACAT CATCAAGAAG
GCCGCCGCCG ACTCGGTGCC GTACTACGAA AAGCTGTGGA CCGCGCGCGA AGCCGACGCG
AGCAAGACGG TCACGAAGGG CGGCGCGACC ATCGTCGCCT CGTCGCAGAT CGATCGTGCT
GCGTTCGTGA AGGCCATGCA GCCGGTCTGG GCGAAGTACG AAAAGACCCC GCAGATGAAG
CAGCTCGTCG ACGAGATTCA GGCCGTCAAA TAA
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| Protein sequence | MNKKFASSRV SMIVAASVLA FSTVSAHARV FRVSDVHGDT YPTNMAVKYM GEQINKATGG
KDSVKVFGNS ALGSENDTID QVRIGALDMA RANGAAFNEI VPESMIPSLP FLFRDIDHFR
KVMYGPEGQK ILDAFKAKGM IALTFYESGA RSIYTKKPIH SPADMKGLKV RVQPSDLMVD
EIRAMGGTPT PMPFAEVYTG LKTGLVDAAE NNLPSYEETK HFEVAPVYSE TQHSMTPEVL
VFSKKVWDTL TPQEQDIIKK AAADSVPYYE KLWTAREADA SKTVTKGGAT IVASSQIDRA
AFVKAMQPVW AKYEKTPQMK QLVDEIQAVK
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