Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1728 |
Symbol | |
ID | 4007778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 1456808 |
End bp | 1457866 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637950963 |
Product | putative capsular polysaccharide transport outermembrane protein |
Protein accession | YP_553588 |
Protein GI | 91778380 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.0503982 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATGA CGGCACCTCC GACGCTACCG CTGACTAGTG GCGACGCACA GACTCCGCCG GTCGATCTTC AGGTGCCGAT AGTCGACATC AATACCGCAT TGATCAGGAA GATGCGCGAT GAAGTCGGGC AGCCGACCGC GGTCGAGAGC AACAAGCTTT TTGCCTACAC CTCCGGATAT ACGCTCGGCG TGGGCGACGT ACTGCAGATT ACGGTTTGGG ATCATCCTGA ACTTGCCGTC GCGCAAGGCA TGCAGCAGAC CCAGACAAAC GTACAGCGCA GTACGGATCC GGCAGCCGGT TTCGTTATCG AAAAAGACGG TACGGTTCGT TTTCCATACG CCGGGAAGAT TGCTGTCCGC GGCCTTCAGG TTGGTGAAGC CCAGGAGCGG ATTGCCGCCG CGTTGAGGCG CGTCTTCGAG AATCCACAGG TCACGGTCAG GGTTGCGTCC TACCGTGCGA AAGAGGTCTA CGTGGACGGC CAGGTCAGGA GTCCGGGCGC CATATCCATA ACCGACATCC CGATGACGCT CTACGAAGCG ATCACGCGGG CAGGCGGCCT CGCTGACAGC GCCGACCAGA GCCGCATGAT ACTGGTGCGC GACGGTGTCT CCTATCAGAT AGATCTCGCG AAGATGCTTG CTCGCGGAGA GAACCCTTCG AAAATCCTGA TGCAGAACGG CGATCTGCTG CGAGTCGTCT CGCGTGACGA AAGCGGCGTC TACGTCATGG GCGAAGTCAA TAAACCAGCT ACCGCTTATC CGTTGAGAAA TGGCGCGCTG ACGCTCAGTG AAGCACTGGC TCAGGCGGGA AGTATCAACT CGAATTCCGC CGACGCCGCG CAACTCTACG TAATACGCAG TTCGGGAGGC GCAAATCCCG AAGTCTTCCA TCTGGACGCC CGCTCGCCCG TATCAATGAT TCTGGCGAAC GAGTTCCAGT TGCAACCGAA GGACGTGGTG TATGTGGACG GCAGCGGGCT TGTCCGGTTC AGCCGTGTTC TTAGCCTGCT CCTGCCGGCG ATCAACGCGG GTCTAACCAC GGCAATCGTG ACGAAATGA
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Protein sequence | MRMTAPPTLP LTSGDAQTPP VDLQVPIVDI NTALIRKMRD EVGQPTAVES NKLFAYTSGY TLGVGDVLQI TVWDHPELAV AQGMQQTQTN VQRSTDPAAG FVIEKDGTVR FPYAGKIAVR GLQVGEAQER IAAALRRVFE NPQVTVRVAS YRAKEVYVDG QVRSPGAISI TDIPMTLYEA ITRAGGLADS ADQSRMILVR DGVSYQIDLA KMLARGENPS KILMQNGDLL RVVSRDESGV YVMGEVNKPA TAYPLRNGAL TLSEALAQAG SINSNSADAA QLYVIRSSGG ANPEVFHLDA RSPVSMILAN EFQLQPKDVV YVDGSGLVRF SRVLSLLLPA INAGLTTAIV TK
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