Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1699 |
Symbol | |
ID | 4007807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | + |
Start bp | 1491699 |
End bp | 1492859 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637950992 |
Product | OmpC family outer membrane porin |
Protein accession | YP_553617 |
Protein GI | 91778409 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.0712335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.645361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGGC AAGTGTTCGC GCTAGCTGTC TCCGCCGCTG TGTCTGTCGC TTTTGCCGCG TCCGCCTCGG CGCAGACGAG CGTGACGCTT TACGGCGTGC TCGATGAAGG CATCAACTAC ACCAACAATG TCGGCCGCGG CCATGTCTAT GAACTGGCGA GCGGCGACGC GCAGGGCAGC CGCTGGGGGC TGAAAGGCGC CGAGGAACTG GGCGGCGGAC TGAAGGCCAT TTTCCAGCTG GAAAACGGTT TCGACGTGAG CTCCGGCCGG TTCAACCAGG GCGGCCGGAT GTTCGGCCGC CAGGCGTTCG TGGGTTTGAG CGCGGAGCGA TACGGCACGC TGACGTTCGG CCGCCAGTAC GATTCCGTGG TCGACTATCT GGCCCAGACC ACGGCCAACG GCAGTTGGGG CGGCTTGCTG TTCTCGCACC CGTACGATAA CGACAACACG GACAACACGT TTCGTCTCGA CAACTCGGTC AAGTACACCA GTCCGTCGCT TTCCGGTTTC CAGTTCGGCG GTGTCTACAG CTTCAGCAAC GACACCGGTT TCGCCAACAA TCGCGCGTAC AGTTTCGGCG GCCAGTATGC GTATGGCGGC TTGCTGGTGG CGGCTGCGTA TCTGCAGGCC GACAATCCCG GCAATGGCGC GAACGGCGCG ATCACGGCGA ACGACGCCAG CTTCATCGCT GCCCGCATGC GTGTGTTCGG CGGCGGCATT ACCTATACGT TCGGCCCGGC GACGGCCGGT TTCGTCTACA CCAATTCGAA CTATCTGGAT CCGACCGGCA ACGGGTATCT CGGCGTGACG CCGCTCGTGC CGCCGGGCGT GCTGCTGAAT TCGCTGAAGT ATCAGAACTT CGAACTGAAC GGCAAGTATC AGATCTCGCC GATGCTGTTC GTCGGCGCGC AGTATGTGTA CTCGATGGAA ACCTTCGACG CCTCGACTGG CGGCGTGAAG CCGAAAATCC ATTCGTTCGG CCTGATGGCG GACTACAACC TGTCCAAGCG CACCGACGTC TACATTCAGG GCGAGTATCA GCAGGTGACT GGCGACTCGA CCTATTCGAT TCTCGACGAG GCCTTCACGC CCGGCACGCA GTCCCCTTCA TCGACGTCGA AGCAGGTCGT GGTGCGGGCG GCGATCCGGC ATAAGTTCTA G
|
Protein sequence | MNRQVFALAV SAAVSVAFAA SASAQTSVTL YGVLDEGINY TNNVGRGHVY ELASGDAQGS RWGLKGAEEL GGGLKAIFQL ENGFDVSSGR FNQGGRMFGR QAFVGLSAER YGTLTFGRQY DSVVDYLAQT TANGSWGGLL FSHPYDNDNT DNTFRLDNSV KYTSPSLSGF QFGGVYSFSN DTGFANNRAY SFGGQYAYGG LLVAAAYLQA DNPGNGANGA ITANDASFIA ARMRVFGGGI TYTFGPATAG FVYTNSNYLD PTGNGYLGVT PLVPPGVLLN SLKYQNFELN GKYQISPMLF VGAQYVYSME TFDASTGGVK PKIHSFGLMA DYNLSKRTDV YIQGEYQQVT GDSTYSILDE AFTPGTQSPS STSKQVVVRA AIRHKF
|
| |