| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1254 |
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| Symbol | |
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| ID | 4008257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 1978161 |
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| End bp | 1979390 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637951432 |
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| Product | OmpC family outer membrane porin |
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| Protein accession | YP_554052 |
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| Protein GI | 91778844 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.393041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGTT TTGGCGTCGG CGTTTCTATA CTCGCGTCGC TGTTCAACAT GACATTCCAG
CTACGCAGGA GCATAGACGT GAAAAAGATT TCCGCCGCAG TCGCGGCATT CGTAGCCCTC
GCTGCCGCCT CGGCACATGC GCAAAGTTCG GTCACGCTGT ACGGCCTCAT CGACGCCGGC
CTGATGTACA CCAACAACGT GAAGAAGGGC GGCTCGGAAG GCGCGCTGGT TCAGGCCACG
AGCGGCAATA TCAACGGCAG CCGCTTCGGC TTGCGCGGCG CCGAAGATCT CGGCGGCGGC
CTGCAGGCGA TCTTCGTGCT CGAGAACGGC TATAACGTGC AGAACGGCAA GCTCGGCCAG
AACGGCCGTC TGTTCGGCCG CCAGGCGTTT GTCGGCTTGA GCAACAAGGA GTACGGCGCG
GTCACGCTCG GCCGGCAGTA CGACTCGCTG GTCGACTTCG TCGCGCCGCT GTCGGGCACG
GCGGGCACGT TCGGCGATAC CGGTTTTGCG CACCCGTTCG ATAACGACAA TCTGAACCAC
TCGGTGCGGA TGAGCAATTC GGTGAAGTTC ATGAGCTCCA ACTATGCCGG CCTGAAGTTC
GGCGGCTTGT ACGCGTTCTC GAACAACACG GATTTCTCGA TCAATCGTGC GTATAGCGCG
GGCGTGAGCT ATGCCAACGG TCCGTTCAAG GCGGCCGCGG GCTACCTGCA GATCAACGGT
TCGAACTCGA CCACCAACAC GGGCGGCGCG GTCGATCTCG GCGAATCCAC GGCCAACGGC
ACGGGCGGCT TCCAGCTCGG CGCCGATGTG CAGCGTACGG CCGGCGCCGG CTTGAGCTAC
GCGTTCGGCC CGGTGACGGC AGGCTTCGTC TACACGCACA GCCAGTTCCA GAACACCACT
TCGTTCGGCG CCACGCACGG CTCGATGCGC TTCGATAACT ACGAACTGAA CGGCAAGTAC
GCCCTCACGC CGGCGGTGAC GCTCGGTGCG GCTTACACGT ACACGGACGC GCATGTGGGC
GGCACGTCGA CCTACGGTTC CGATTCGAAA TGGAATCAGG TGAACCTGCA GGCCGTCTAT
GCGCTGTCGC TGCGCACCGA CGTCTACGCC GAAGCGATGT ACCAGCACGT GACCGGCAAG
GGCTACACCG CGTTCATCAA CACGGCTGGC GGCGCGTCTT CGACGGGCAA TCAGGTGGTG
GGCGCCGTGG GTATCCGCAC GCGCTTCTGA
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| Protein sequence | MSGFGVGVSI LASLFNMTFQ LRRSIDVKKI SAAVAAFVAL AAASAHAQSS VTLYGLIDAG
LMYTNNVKKG GSEGALVQAT SGNINGSRFG LRGAEDLGGG LQAIFVLENG YNVQNGKLGQ
NGRLFGRQAF VGLSNKEYGA VTLGRQYDSL VDFVAPLSGT AGTFGDTGFA HPFDNDNLNH
SVRMSNSVKF MSSNYAGLKF GGLYAFSNNT DFSINRAYSA GVSYANGPFK AAAGYLQING
SNSTTNTGGA VDLGESTANG TGGFQLGADV QRTAGAGLSY AFGPVTAGFV YTHSQFQNTT
SFGATHGSMR FDNYELNGKY ALTPAVTLGA AYTYTDAHVG GTSTYGSDSK WNQVNLQAVY
ALSLRTDVYA EAMYQHVTGK GYTAFINTAG GASSTGNQVV GAVGIRTRF
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