| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1231 |
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| Symbol | |
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| ID | 4008280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2007351 |
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| End bp | 2008811 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637951455 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_554075 |
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| Protein GI | 91778867 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0812696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.324306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCAG TCGGTTCGAG TTTTTTCTGG GTGTCGGCAG TTGGGCTTTG CCTGTGTCTG
AGCGGCTGCC TGATGGGTCC AGACTATGTG AGACCGTCTG TCGAAACACC GGCCACGTTT
CGCTTTTCAG ATAGTACCCA GGCGCAGATC GTCGATACGG CGTGGTGGGC GCAATTCGGC
GACCCCGTGC TGAACGAACT CATTTCGACC GCGCTCGCGC AGAACAGGGA CCTGAAAATC
GCCGCGGCCC GAGTCGACGA GTTTCGCGGA CAGTTCGTCA CCACGCGTTC GCAACTATTT
CCGCAGATCA GTGCGGGTTT CAACGCCGGT CGCCAGCGTG TCTCGCCGCT TGCCCAAAGT
TCGTTGCCGG CCGGTATCGG GACGGACTAC ACCTCGTTCA ATGCCACGCT GCCCATCTCA
TGGGAAATCG ACGTGTTCGG CCGCGTGCGG CGTCAGACCG AAGCCGCGCG CGCGAACCTG
CTCGCCAGCG AGGAAGGGCA GCGGGCCACG CTGCTTACGC TCGTCGCATC GGTTGCCACG
TCCTATATCA ATCTGCGCAG TCTCGATCAG CAACTCGAGA TTGCCAGGGC AACCGCGGCC
AGCCGCGCCA GTTCCGTGAA GGTCTTCGAA CTGCGCTTCA AGGGCGGGCA GATCTCACAG
GTCGAACTGG CCCAGAGTCA GTCGGAATAC GAGGCATCGC TCGCGGATAT TCCCGCCATT
GAAGCGCAGA TCGGGCAGCA GGAAGACGCG TTGTCGGTAT TGCTCGGCCG CAACCCCGGT
CCCATTCTTC GCGGCCGCAC GCTCGACGAA CTCCAGGCTC CCGGTGTGCC GGCGGGCTTG
CCTTCGGAGT TGCTCGCGCG CCGTCCGGAC GTGCTGCAGG CCGAACAGAA CCTGGTTGCC
GCCAACGCAT TGATCGGCGC CGCGCGTGCG CTTTATTTTC CACAGATTTC GCTCACGGGA
TTGCTCGGCT CGTCGAGCAC GCAGTTAAGC CGGCTCTTTA GCGGCCCGGC GAACACCTGG
GCGTTTGCCG GAGCACTGAC GCAACCCATT TTCTCGGCCG GCAACATTGC CGGACAGGTC
GAGCAGGCCA AGGCACGCCA GCAACAAGCG CTCTACGCGT ATCAGAAGGC CGTTCAGTCC
GCATTCCAGG AAGTCAGCGA CGCACTTCTC GGGGTCGGGA AGTCACGCGA ACGGCTGGCC
GCGCAGGAGC GCCAGGTCGA TGCGCTGAGC ACCTACGCAA AACTCGCGCG ACAACGCTAC
GAAGGCGGCT ACACGAGCTA CATGGAAGTT CTCGACGCCG AGCGCAGTCT GTTCAGCGCG
CAACTGGCTT ATACGCAAAC TCGCGGCAAT GAATACACGT CTCTCGTCAC GCTTTACAAA
GCGCTGGGCG GCGGCTGGGG CACGGACGCA CTCGCAGGCT TGGAGCAAGG CGGGACCGGC
GCGCAAGCCG AAACACGATA G
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| Protein sequence | MRPVGSSFFW VSAVGLCLCL SGCLMGPDYV RPSVETPATF RFSDSTQAQI VDTAWWAQFG
DPVLNELIST ALAQNRDLKI AAARVDEFRG QFVTTRSQLF PQISAGFNAG RQRVSPLAQS
SLPAGIGTDY TSFNATLPIS WEIDVFGRVR RQTEAARANL LASEEGQRAT LLTLVASVAT
SYINLRSLDQ QLEIARATAA SRASSVKVFE LRFKGGQISQ VELAQSQSEY EASLADIPAI
EAQIGQQEDA LSVLLGRNPG PILRGRTLDE LQAPGVPAGL PSELLARRPD VLQAEQNLVA
ANALIGAARA LYFPQISLTG LLGSSSTQLS RLFSGPANTW AFAGALTQPI FSAGNIAGQV
EQAKARQQQA LYAYQKAVQS AFQEVSDALL GVGKSRERLA AQERQVDALS TYAKLARQRY
EGGYTSYMEV LDAERSLFSA QLAYTQTRGN EYTSLVTLYK ALGGGWGTDA LAGLEQGGTG
AQAETR
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