| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1175 |
|---|
| Symbol | |
|---|
| ID | 4008336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2076670 |
|---|
| End bp | 2077416 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637951511 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_554131 |
|---|
| Protein GI | 91778923 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 0.621986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.19706 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTTC ACCCGATCCA GTCCTTCACG CGCAAACGGC TGTCCGACGT GGTGTCCGAC
CAGATCAAGC AACTGATTTC GGACGGCACG CTGATGCCCG GCGACCGGCT GCCGGCCGAA
CGCGACCTGG CTACGCAGCT CGGCGTGTCG CGGCCTTCGC TGCGCGAGGC GCTGATCAGG
CTGGAAGCGG ACGGCTATAT CGAAACCTCG GGGCGGGGCG GTTTTACGGT GGTCGACGTC
ACGGCGCCGA TCATCTCCAA GCCGCTGGCG GAGTTGCTGC TGCAGAATCC GCGCACCAGT
GCCGATATTC TGGAGCTGCG CCAAGGGCTC GAATCGATTT CGACGGTCTA TGCCGCGCAG
CGCGCCACGG CCGCGGACCT GAAGAAGATC AGCGCGGCAT TCGAGGCATT GAAAGCCGGC
TCGCAGTCGC AGGACCGTGT GAACCTCGCC GAACTGGACG CCGCGTTCCA CCTCGCGATC
GCGGACTCCA CGCACAACAT TGCACTCGCG CATGTGATGC ACGGCATCCA TACGCTGATT
CGCGAGGGTA TGCGCCAGTA CCATCGTTTG ATCGATTACG ACGACGCGAT GGAAAAGCAG
TTGATGGGCC AGCACCAGGC CATTTACGAC GCCGTGATGT CGCGTGACGC GCAAAAGGCA
CGCAAGGCCG CCGAGCGTCA TTTGACCTAT GTGCGCGAGA TGTACAAGGA AGACGCGGCC
AGGCCTTCGT CGAGTACGGT TTCGTAA
|
|---|
| Protein sequence | MPFHPIQSFT RKRLSDVVSD QIKQLISDGT LMPGDRLPAE RDLATQLGVS RPSLREALIR
LEADGYIETS GRGGFTVVDV TAPIISKPLA ELLLQNPRTS ADILELRQGL ESISTVYAAQ
RATAADLKKI SAAFEALKAG SQSQDRVNLA ELDAAFHLAI ADSTHNIALA HVMHGIHTLI
REGMRQYHRL IDYDDAMEKQ LMGQHQAIYD AVMSRDAQKA RKAAERHLTY VREMYKEDAA
RPSSSTVS
|
|---|
| |