Gene Bxe_B0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B0894 
Symbol 
ID4008617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp2376418 
End bp2377419 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content64% 
IMG OID637951790 
ProductABC sugar transporter, periplasmic ligand binding protein 
Protein accessionYP_554410 
Protein GI91779202 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTA ATTCCCGCAG GCTTCCTGTC GCCAGGAAAA TCGTGTCGAT GTGCGTCGCG 
GCGGCGGCGT GGTGTGCGAG CGCGAGCCAG GCGGCCGATC AGCCTGTTGT CGGCCTCATC
ACCAAGACCG ACACCAACCC GTTCTTCGTG AAGATGAAGC AGGGCGCCGA AGCAGCGGCC
TCGAAAGACG GCGCGAAGCT GATCACCGCC GCGGGCAAGT TCGACGGCGA CAACGCGAGC
CAGGTCACCG CCATCGAAAA CATGATGACG GCCGGCGCGA AAGCGATTCT GATCACGCCG
AGCGACACCA AGGCGATCGT GCCGAGCATC AGGAAAGCCC GCGCGGCCGG CGTGATGGTG
GTCGCGCTCG ACACGCCGAC CGATCCGCAG GACGCCACCG ACGCCCTCTT CGCCACCGAC
AACTTCAAGG CCGGCGTGCT GATCGGCAAA TACGCCAAAG CCGCGCTGAA CGGCAAGCCC
GCGAAGATCG CCACGCTCGA TCTCGCGCCT GGCGTTTCGG TTGGCGTGCT GCGTCATAAC
GGCTTTCTGC AGGGCTTCGG CGTGAAGGAA GGCGATCCGT CGGTGGTGTG CAGCCAGGAC
ACGCGCGGCG ACCAGGCCAA GGGCCAGACG GCGATGGAAA ACTGCCTGCA GAAATCGCCC
GACATCAACG TGGTCTACAC GATCAACGAG CCGGCCGCGG CGGGCGCTTA CCGCGCGCTC
AAGGCGGCGG GCAAGGACAA GAGCGTGATG ATCGTCTCGA TCGACGGCGG CTGTGAAGGC
GTGCGCAACG TGAAGGCGGG CGCTATCGCT GCGACCTCGC AGCAATATCC GCTGAAGATG
GCCTCGCTCG GCGTGACGGC CGGTGTCGAG TACGCGAAGA CGGGCAAGAA GGTCTCCGGC
TATCAGGACA CCGGCGTGAC GCTGATCAGC GACAAGCCGA TGTCCGGCAT CGACAGCAAG
GACACGAAGT TCGGCCTCGA CAACTGCTGG GGCAACAAGT AA
 
Protein sequence
MNPNSRRLPV ARKIVSMCVA AAAWCASASQ AADQPVVGLI TKTDTNPFFV KMKQGAEAAA 
SKDGAKLITA AGKFDGDNAS QVTAIENMMT AGAKAILITP SDTKAIVPSI RKARAAGVMV
VALDTPTDPQ DATDALFATD NFKAGVLIGK YAKAALNGKP AKIATLDLAP GVSVGVLRHN
GFLQGFGVKE GDPSVVCSQD TRGDQAKGQT AMENCLQKSP DINVVYTINE PAAAGAYRAL
KAAGKDKSVM IVSIDGGCEG VRNVKAGAIA ATSQQYPLKM ASLGVTAGVE YAKTGKKVSG
YQDTGVTLIS DKPMSGIDSK DTKFGLDNCW GNK