| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0884 |
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| Symbol | |
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| ID | 4008627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2389103 |
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| End bp | 2389993 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637951800 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_554420 |
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| Protein GI | 91779212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC AAGCGAACGC ACAACCGAAC GCACAGGCAA CCCCCCACTC CTACCTGGTC
GGTCTGATTG GCTCGGGCAT CGGCGGATCG CTCACGCCCG CGATGCACGA GGAAGAGGGC
AGCCAACTCG GCCTGCACTA CGTGTACCGC CGCATCGATC TGGAAGCGTT GAAGCTCGAC
ATCGCCGCAC TGCCGGATCT GCTCATCGCC GCCGAGCGCA TGGGCTTCAA CGGTCTGAAC
ATCACGTACC CGTGCAAGCA GGCGGTGATT CCTTTGCTCG ACGAACTGTC CGGCGACGCT
CGTGCACTCG GCGCGGTCAA CACCGTTCTG TTCAAGGACG GCAAACGCAT TGGCCACAAC
ACGGACTGGT CCGGTTTCGC CCGTGCGTTC CAGCGCGGTT TGCCTGACGT GTCGCTGGAA
CGTGTCGTGC AACTGGGCGC GGGCGGCGCC GGCGCGGCGG TCGCGCACGC CGCGCTGACC
TTGGGCGCGA AATCGCTCAC GCTATTCGAT GTGGATGCTT CGCGCGCCGC CTCACTCGCC
CGCGAATTGC AGAAGCGCTT TCCCGCCGCC GCGATCAGCG CCGGCAGTTC GCTCGCCGGG
TCGCTCACAG CTGCCAATGG CCTGATTCAC GCCACACCCA CCGGCATGGC GAAATTGCCC
GGCCTGCCGC TGCCGGTCGA ATTGCTGCAC CGTGACCTGT GGGTAGCGGA CATCGTCTAT
TTCCCGATTC GCACGGCGCT GCTGCAGGCG GCTGAGTCAC TCGGCTGCCG CACGCTGAGC
GGCGGCGGCA TGGCGGTGTA TCAGGCGGTC GACGCCATGC GCATCTTCAC CGGTCTCGAA
CCCGACGCCG AGCGGGTGTA TCGCCATTTT CAGTCGTTGT TGCAGCGCTA G
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| Protein sequence | MNAQANAQPN AQATPHSYLV GLIGSGIGGS LTPAMHEEEG SQLGLHYVYR RIDLEALKLD
IAALPDLLIA AERMGFNGLN ITYPCKQAVI PLLDELSGDA RALGAVNTVL FKDGKRIGHN
TDWSGFARAF QRGLPDVSLE RVVQLGAGGA GAAVAHAALT LGAKSLTLFD VDASRAASLA
RELQKRFPAA AISAGSSLAG SLTAANGLIH ATPTGMAKLP GLPLPVELLH RDLWVADIVY
FPIRTALLQA AESLGCRTLS GGGMAVYQAV DAMRIFTGLE PDAERVYRHF QSLLQR
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