| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0851 |
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| Symbol | |
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| ID | 4008660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2417288 |
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| End bp | 2418901 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637951833 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_554453 |
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| Protein GI | 91779245 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0238751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00377502 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGCT TTGAATCTTT GAGTGGGTGG GGCCGGGCGG CTGCCAGCGG TTTGCTGGTT
GCATTGCTCG CTGCCTGCTC CGTCGAGCCG ACTTATAAAC GGCCTGAAGT GGATACGCCG
GTTGCGTTCA AGGAAGCGCC CGCTGCGTCA GCGCCGTCTG CGGCGTCCGC GCCGTCGGCT
GGATCGGCGC AGGACAACGG CACCTGGAAG CAGGCGCAGC CCGCCGACGA CGCGCATCGC
GGCGAATGGT GGACGATTTT CGGCGACCCG CAGCTCAACG CGCTCGAAGA GCAGGCGGCC
GCCGCCAATC AGGACCTGAA GGCCGCCGCG GCGCGCGTGC AGCAGGCGCG GGCGGTGACG
CAGGCGGCCA GGTCGGACTG GTTCCCGAAG CTCGACGCGG GCTTTGGCCC AACGCGCGAG
CGTGCTTCGG CGGCGTCGCA ATTCCTGCCG GACAACGCGG GCGGCACGAA CGGCACGATC
TGGCGCGCGC AGGTTGGCGC ATCGTACGAG GCGGATCTGT TCGGGCGGGT CGGTTCGAAC
GTGAACGCGT CGCGGGCGGA CGAGCAGCAA AGCGAAGCGC TGTTCCGTTC CGTGCAACTG
TCGTTGCAGG CGGACGTCGC GCAGAACTAC TTCCAGTTGC GCGAGCTCGA TACGGACCAG
GACCTGTACC GCCGCACCGT GGCGTTGCGC GAGGATACGC TGAAGCTCGT CGAACGGCGT
TTCAAGGAAG GCGATATCGG CGAACTGGAT GTCTCGCGGG CCCGCAACGA ACTCGCGAGT
GCGCGTGCGG ACGCCGTGGG CGTGGCGCGT CAGCGTGCCG CGTCGGAGCA TAGCCTCGCG
ATTCTGCTCG GCAAGCCGCC GGCGGATTTC TCGTTCGCGG AAGCGCCGCT GGTGCCGGTG
ACGGTGCGGG TGCCGCCGGG TCTGCCCTCG GCGTTGCTTG AGCGCCGCCC GGATATTTCG
GCTGCGGAAC GGGCGATGCA GGCCGCGAAC GCGCGTGTCG GCCTGGCGAA ATCGGCGTTC
TTCCCGAAGC TCGACATCAC CGGTGCAGCT GGTTTTGAGT CGGCGACGCT CGGCGATCTG
TTCATGTGGT CGAGCCGGGC GTTCATTCTC GGGCCGTTTG CCGGCACGGC GTTGACGCTG
CCTTTGTTCG ACGGCGGCCG CCGCAAGGCG AATCTCGCGC AAGCCCGTTC GAAGTACGAC
GAGGACGTTG CGCAGTATCG TCAACAGGTG CTGGTGGCGT TCCGTGAAGT CGAAGACAAC
CTCGCCGATT TGCGCCTGCT CGACGATCAG ATGCGCGAGC AGAACGATGC GGTGCAGGCA
TCGCAACGGG CGGCGCATCT GTCGCGTACG CAGTACACGG AAGGCGCGGT CAGCTATCTG
GACGTGATCG ATGGCGAGCG GCAGGTGCTG ATTTCGCAGT TGCAGGCGAG CCATCTGTCG
GGCACGCAGG CGGTGGCGAC GGTTAATCTG ATTCGCGCGC TGGGCGGTGG CTGGGGCGGC
GTGAATGCGC CGGATACGGC GGTGGGCGCG GTTGCGCCGG CATCGGCTCC TGTGGCGGCG
GTTGCTGCGT CGGCGCCCGC TTCCGCTTCC GTGCAGCAGG TGGCGAAGCA GTAA
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| Protein sequence | MKRFESLSGW GRAAASGLLV ALLAACSVEP TYKRPEVDTP VAFKEAPAAS APSAASAPSA
GSAQDNGTWK QAQPADDAHR GEWWTIFGDP QLNALEEQAA AANQDLKAAA ARVQQARAVT
QAARSDWFPK LDAGFGPTRE RASAASQFLP DNAGGTNGTI WRAQVGASYE ADLFGRVGSN
VNASRADEQQ SEALFRSVQL SLQADVAQNY FQLRELDTDQ DLYRRTVALR EDTLKLVERR
FKEGDIGELD VSRARNELAS ARADAVGVAR QRAASEHSLA ILLGKPPADF SFAEAPLVPV
TVRVPPGLPS ALLERRPDIS AAERAMQAAN ARVGLAKSAF FPKLDITGAA GFESATLGDL
FMWSSRAFIL GPFAGTALTL PLFDGGRRKA NLAQARSKYD EDVAQYRQQV LVAFREVEDN
LADLRLLDDQ MREQNDAVQA SQRAAHLSRT QYTEGAVSYL DVIDGERQVL ISQLQASHLS
GTQAVATVNL IRALGGGWGG VNAPDTAVGA VAPASAPVAA VAASAPASAS VQQVAKQ
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