| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0705 |
|---|
| Symbol | |
|---|
| ID | 4008806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2585496 |
|---|
| End bp | 2586872 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637951978 |
|---|
| Product | RND heavy metal ion efflux pump, outer membrane protein |
|---|
| Protein accession | YP_554598 |
|---|
| Protein GI | 91779390 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.199067 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.26582 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGCAC TGCGGCAGCG CCGTAGCATC GGTCGCACCT GGTCAACATC TCACATAGCC
ATGCTTACCC GCAACCTTGC TGCCGTCCTT GCGCTTGCTG CGGTGAGCAC GGCTTTCGGA
CAAACGGCTG CGCCCCTGGC GCCGGGTTCT TCAGCCGCGC CGTCGATAGG ACAGGCCCCG
GCGCAGGAAG GCGCTGCCTT GCCGCTCGAC GAGGCGCTCG GCATCGCAGC CGGGAACAAC
CCGTTGCTGC GCGGCGCGCG TGCCGACGTG GATGCGTCGG GCGGCGCGTT CATGCAGGCG
GGCGCCCGGC CCAATCCGCA GCTATCGCTG CTGCAGGAGG GGTTCGGCGG AACCGAGCGC
ACCTCGACGG CGCTCCTCAA CCAGACCGTC GAGCTCGGCG GCAAGCGTCA GGCGCGGCTG
GACGTCGCTT CCTATGGGCG TGAAGTGGCG CTCGCATCGC TCGACGCGCG CGCGGCGGCG
CTGCGCTCGG ACGTCATCGC CGCGTTTTAC GGATTGCTTG CGGCGCAACG CCAGTTGCGG
GTCGCGCAGG AGTCCGCCGA TATCGCGGAG AGGTCGGCGG AGCTGGCGGA AAAACGCGCG
CGGGCGGGCA AGGTGTCGCC GGTCGAGGCG ACGAAGGCGC GGGTCGCCGC GACCGGAGTT
CAGATCGAAC TGGCCAACGC CGCCGCGCGG CTGACGATTG CGGCGGAGAA GCTCGTGAAC
GTGACGGGCA GTCCGCTCGT GCGAGGACGC CCCGTTAGCG GCGACATCGA GAGCGTGCCG
GTGGTCGGCT CGCTCGCCCA ACTCCTGCCT CAGCTGTCCG ACGCGCCGCT TGCCCGAGCG
GCGAAGGCGG AGACGCTTCG GGCCAACGCC GCCATTTCCG TGGAGCGCGC AAAGCGCATC
CCCGACGTCA CGTTCAGCGT CGGCATGAAG CGGGTCGTGA CGGGCGGCGT TCCCGGCAAC
CAGGCGGTGG TCGGCGTGTC CATTCCGCTT CCGCTTTTCG ACAGCAACAA GGGCGCGCTG
CTCGAATCCG TTCACAAAGC CGGCAAGGCG AGCGCCGGCT TCGACAGTGA AACGGCCCGC
CTGCAACTGG AATTGACGCA GGCGTACGCC AATTACGAGA GGTCGAGCCT GGAGGCGCGA
CGCCTGAAAG CCGATGTGCT GCCGGCCGCG CGCGAGGCGC TCGATGCCAT GTCGCGCGGC
TACGAACTCG GCAAGTTCGG CTTTCTGGAT GTGCTGGACG CGCAGCGCAC GTTGTTCCAG
GGCCAGTCGC AATACGTGCA GGCATTGACG GATGCGCACC TTGCCTATGC CGATATCGGA
CGGCTTGTCG GCGTCCCCCT GAACGACGTT GCTGACTCGA CGCCACGCCT GCCTTGA
|
|---|
| Protein sequence | MLALRQRRSI GRTWSTSHIA MLTRNLAAVL ALAAVSTAFG QTAAPLAPGS SAAPSIGQAP
AQEGAALPLD EALGIAAGNN PLLRGARADV DASGGAFMQA GARPNPQLSL LQEGFGGTER
TSTALLNQTV ELGGKRQARL DVASYGREVA LASLDARAAA LRSDVIAAFY GLLAAQRQLR
VAQESADIAE RSAELAEKRA RAGKVSPVEA TKARVAATGV QIELANAAAR LTIAAEKLVN
VTGSPLVRGR PVSGDIESVP VVGSLAQLLP QLSDAPLARA AKAETLRANA AISVERAKRI
PDVTFSVGMK RVVTGGVPGN QAVVGVSIPL PLFDSNKGAL LESVHKAGKA SAGFDSETAR
LQLELTQAYA NYERSSLEAR RLKADVLPAA REALDAMSRG YELGKFGFLD VLDAQRTLFQ
GQSQYVQALT DAHLAYADIG RLVGVPLNDV ADSTPRLP
|
|---|
| |