| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0647 |
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| Symbol | pcaC |
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| ID | 4008864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 2657218 |
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| End bp | 2657610 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637952036 |
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| Product | 4-carboxymuconolactone decarboxylase (PcaC) |
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| Protein accession | YP_554656 |
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| Protein GI | 91779448 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02425] 4-carboxymuconolactone decarboxylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.153527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGACG AAGACCGTTA CGAAGCCGGA CTCGGAGTGC GCCGCGCGGT GCTGGGTAGT
GCGCACGTCG ACCGGTCGCT CGCGAACCGC ACTGAGCTGA CGGAAGAGTT TCAGAATTTC
ATCACCCGCT ATGCATGGGG CGAAATCTGG ACGCGCGAGG GCTTGCCGCG TCACACGCGC
AGCCTGCTGA CCATCGCGAT GATGGTCGCG CTCAACCGCG GCGAAGAACT CGCACTGCAT
CTGCGCGCCG CGAAGAACAA CGGTGTGACG CGTGAGCAGA TCAAGGAAGT GCTGCTGCAA
AGCGCGATCT ATTGCGGTGT GCCGGCGGCC AATTCGGCGT TTCATCTGGC CGATAAGCTG
TTTCGCGAAG ACGACGCGGC GGTGCAGAAG TAA
|
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| Protein sequence | MNDEDRYEAG LGVRRAVLGS AHVDRSLANR TELTEEFQNF ITRYAWGEIW TREGLPRHTR
SLLTIAMMVA LNRGEELALH LRAAKNNGVT REQIKEVLLQ SAIYCGVPAA NSAFHLADKL
FREDDAAVQK
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