| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0642 |
|---|
| Symbol | |
|---|
| ID | 4008869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 2661592 |
|---|
| End bp | 2662521 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637952041 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_554661 |
|---|
| Protein GI | 91779453 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 0.915851 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.108834 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA CAAACCTGGA TCTGAACCTG ATCCCTTACC TGGTCGCGAT GGAAGACACG
CGCAATGTCA GCCGCGCGGC CGAGCAACTC GGCGTGAGCC AGCCGCGCGT GAGCACCGCG
CTGGGAAAAT TGCGCGAGTA TTTCGAGGAT CCGCTTTTCG TGCGCACGTC GAAGGGCATG
GAGCCCACGC CGCGTGCGCT CGCCATCCTG CCCGCCGCGC GCGACGCGCT GCTGCGCATC
GAGAAAGGCA TGCTCGACGT GCAGGAATTC AACCCGGCCG CCAGCACGCG CACGTTCTCG
ATTGCGCTTT CCGATGTCGG CGAAATCGTG TTTCTGCCGC GGCTTCTGCA ACTTTTCGCC
GAACGCGCGC CGTTCGCGAA TCTGCGCTCG GTGACGCTTT CGCCCTCGCA GGTGGAACGC
GGGCTCGAAT CGGGCGACGT CGACCTCGCC GTCGGCTACT TCCCCGATCT GTCGGGCAAT
AACTTCTTCC AGCAGCGGCT CTTCACCCAT CGATTCATCT GCCTGATGCG CACGGGCCAT
CCGCTGTCGA AGGCGCCGCT CACGCTGGCG CAATATGTGG CGTCGGGGCA TGCCGTGGTG
CGCGCCGAAG GACGCAGCCA GGAAGTCCTC GAACACTACC TGGAGAAGAA ACGCATCAAG
CGGCGCGCGG TGCTCGAAAC GCCTCACTTC ATGAGCCTGC CGTTCATCCT CGCGCGCACC
GATCTGCTTG CGACGGTGCC GCACGCGATC GGCTTCGCGT ATGTATCGGA GCACGCGTCG
ATCACGCTGG TCGAGCCGCC GCTGCCGTTG CCGCACTTCG ATCTGCGGCA GCACTGGCAT
CGCAAGTTTC ATAACGATCC GCGCACGAGC TGGCTGCGCG GCGTGGTCGC CGAACTGTTC
AACGACGCGA TGGACGAGTG GCCGAAATGA
|
|---|
| Protein sequence | MSETNLDLNL IPYLVAMEDT RNVSRAAEQL GVSQPRVSTA LGKLREYFED PLFVRTSKGM
EPTPRALAIL PAARDALLRI EKGMLDVQEF NPAASTRTFS IALSDVGEIV FLPRLLQLFA
ERAPFANLRS VTLSPSQVER GLESGDVDLA VGYFPDLSGN NFFQQRLFTH RFICLMRTGH
PLSKAPLTLA QYVASGHAVV RAEGRSQEVL EHYLEKKRIK RRAVLETPHF MSLPFILART
DLLATVPHAI GFAYVSEHAS ITLVEPPLPL PHFDLRQHWH RKFHNDPRTS WLRGVVAELF
NDAMDEWPK
|
|---|
| |