| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0576 |
|---|
| Symbol | |
|---|
| ID | 4008935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | - |
|---|
| Start bp | 2730332 |
|---|
| End bp | 2731270 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637952104 |
|---|
| Product | putative ribokinase |
|---|
| Protein accession | YP_554724 |
|---|
| Protein GI | 91779516 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | [TIGR02152] ribokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.588326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGT CGAAAGAAAC GAAGCAGGGC CGGGTTCTGG TAGTGGGCAG CATCAATACG
GACCTTGTGG CCCGCGCGCC GCATTTGCCG CGCCCGGGCG AGACGATTGG CGGACACGAG
TTCTCGCAGG TTGCAGGGGG CAAGGGCGCG AACCAGGCTG TCGCGGCCGC GCGCATCGGT
GCGCGGGTGG CCATGATCGG ATGCGTCGGG AGCGACGCGA ATGGTGCGCA GCGGGTCAAG
GATCTGGAGG TGGAAGGCAT CGATTGCAGC GGGGTCGAGG TCCATCCCAC CCAACCGACC
GGCGTTGCGA TGGTCACAGT GTCGGACGAC GGCCAGAATA CGATCGTCGT GGTCGCAGGC
AGCAACGGCG AACTCACGCC GCAGAGCGTG GCTCGCCATG AAGCGGCCAT CAAGGCGTGC
GACGTCGTGG TGTGCCAACT CGAAACACCT TGGGATTCCG TTCACGCGAC GCTCGCGCTT
GCCCGTCGGC TGGGCAAGAT CACCGTGCTG AACCCGGCGC CGGCAACCGG GCCGCTGCCC
GCGGAGTGGC TGCCGCTTGT CGACTACCTC GTGCCGAATG AAGTCGAGGC CGCCATTCTG
GCCGGCCTGC CGGTCGAATC GCAAAGCGGC GCGCGGCGCG CGGCGACGGA GTTGCAACAA
GGCGGCGCGC ACAATGTGAT CGTCACGCTT GGCGCGCAAG GGGCTTATCT TCTGGTGGAA
GGTGGCGAGG GCAGGCATTT TCCCGCGCCG CAAGTGCACG CCGTCGATAC CACGGCTGCG
GGCGATACTT TTATCGGCGT TTTTGCCGCG CAACTCGCCT CGCGGCAACC GCTGGAAGGC
GCGATCAATC TCGCGCAACG CGCGGCGGCG ATTTCCGTGA CGCGCGCCGG CGCGCAGCCT
TCGATACCGA CTCGCGCGGA AGTCGATAAC GCCGCCTGA
|
|---|
| Protein sequence | MKVSKETKQG RVLVVGSINT DLVARAPHLP RPGETIGGHE FSQVAGGKGA NQAVAAARIG
ARVAMIGCVG SDANGAQRVK DLEVEGIDCS GVEVHPTQPT GVAMVTVSDD GQNTIVVVAG
SNGELTPQSV ARHEAAIKAC DVVVCQLETP WDSVHATLAL ARRLGKITVL NPAPATGPLP
AEWLPLVDYL VPNEVEAAIL AGLPVESQSG ARRAATELQQ GGAHNVIVTL GAQGAYLLVE
GGEGRHFPAP QVHAVDTTAA GDTFIGVFAA QLASRQPLEG AINLAQRAAA ISVTRAGAQP
SIPTRAEVDN AA
|
|---|
| |