Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B0439 |
Symbol | |
ID | 4009072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 2887172 |
End bp | 2889058 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637952238 |
Product | TRAP dicarboxylate transporter, fused DctM (12TM) and DctQ (4TM) subunits |
Protein accession | YP_554858 |
Protein GI | 91779650 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAATC ACGCATTGAA TCCGGCGGAC GCGGGCGTGC CGCTGCACGC GGCGAGCACG CCGCGCCGCT GGTTGAGGAG TTTCGATCGC GGTCTGATTG CGCTCGTCGA AGTGTGCGCG GCGGCGCTGC TCGCGGTGGA GATCGTCGTG ATGCTCGCGG GCGTGATGTG CCGCTACGTG CTGCATCAAC CGCTCGTGTG GTCCGATGAA CTGGCGGGCA TTCTGTTCCT GTGGCTCGCC ATGCTCGGCG CCGTGCTCGC GTTGCGGCGC GGCGAACATA TGCGGATGAC GGCACTGGTC AGCCGCCTGT CGCCGCAGCG GCGCGCGTTC GTCGATACGC TGGCGATCGC CGCGTCGATC GCATTGCTTG CGCTGTTGAT CGCTCCCGCC TACGACTATG CGTCCGGCGA GGCGGCGATC GTGACGCCCG CCCTGCAGAT CAGCAATGCG TGGCGCGCGC TCGCTTTGCC GATCGGCGCA GCGCTCATGC TGCTGGTCGG TCTGATTCGC CTCGCCCAGG TGAGCCGTGT GCGCGACGTC GTAATCGTGC TCGCGATCAC GGCCGTACTG GCCGCGATAG CCATGTTCGC CGGGCCGTGG TTTCAGACGC TCGGCAAAAC CAATCTCGTG ATCTTTTTCG TGGGCGTGGT GGCGATCGGG ATCTTTTCGG GCGTGCCTAT CGGCTTTTCG TTTGCGCTCG CCACGTTCGG TTATCTGGGC CTCTCGACCT TCACGCCGCT CGAAGTCGTG GTCGGCCGCA TGGACGAGGG CATGTCGCAT CTCGTGCTGC TCGCTGTGCC GCTGTTCGTC TTTCTCGGCT TGCTGATCGA GATGACCGGC ATGGCGCGCG CGATGATCGA GTTTCTCGCG AGCCTCGTCG GCCATGTGCA TGGCGGACTG TCATTCGTGC TGATCGGCGC GATGTATCTG GTGTCGGGCA TTTCCGGTTC GAAAGTGGCG GACATGGCGG CGATCGCGCC CGTGCTGTTC CCGGAGATGA AAAAACGCGG CGCTTCCGAA GGCGATCTGG TCGCGCTGCT CGCCACGACC GGCGCGCAAA GCGAAACCAT TCCGCCGAGC ATTGTGCTGA TCACGATCGG TTCGGTCACG GGTCTGTCGA TCTCCGCGCT CTTCACCGCG GGCATGCTGC CAGGCGCGGT GCTCGCGCTG ATTCTGTGCG CGGTGGTGTG GTGGCGCTAT CGCAAGGAAG ACCTGAGCGG CGCGCAGCGT TTCAGCAAGC GGCAGATCGG GCGTCTGTTC ATCGTGTCGC TGCCCGCGCT GGCGTTGCCG TTTGTGATTC GCATGGCAGT GGTCGAAGGC GTGGCGACGG CAACCGAGGT GTCGACCATC GGCATTGCCT ATTCGATGCT GATCGGCCTG CTGGTGTACC GCCGCTTCGA ATGGCGGCGG CTGGGCCGCA TGCTGGTGGA TGCGGCCACG TTGTCGGGCG CGATCCTCTT CATCATCGGC TGTGCGACTG CAATGGCGTG GGCGCTGACG CAATCCGGCT TTTCGCAGGA TCTTGCGCAA GTCATGGGCT CGATGCCCGG CGGCGCGTAC GGTTTTCTGG CGGTTTCGAT TGTCGTGTTC GTGATGCTCG GCAGCGTGCT CGAAGGCATT CCCGCGATCG TGCTGTTCGG GCCGCTGCTG TTTCCTATCG CGCGGCTCGC GGGCGTGCAC GAAGTGCATT ACGCGATCGT CGTGATTCTC TCGATGGGCG TGGGGCTCTT TTCGCCGCCG TTCGGCGTGG GCTACTACTC GGCGTGCGCG ATCAGCAAGG TCAATCCCGA CGCGGGCATT CGTCCGATTG TCGGCTATAT GGGCGCATTG CTCGTCGGCC TGATTCTGGT CGCGGCGATC CCCTGGATTT CGATCGGGTT TCTCTAA
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Protein sequence | MSNHALNPAD AGVPLHAAST PRRWLRSFDR GLIALVEVCA AALLAVEIVV MLAGVMCRYV LHQPLVWSDE LAGILFLWLA MLGAVLALRR GEHMRMTALV SRLSPQRRAF VDTLAIAASI ALLALLIAPA YDYASGEAAI VTPALQISNA WRALALPIGA ALMLLVGLIR LAQVSRVRDV VIVLAITAVL AAIAMFAGPW FQTLGKTNLV IFFVGVVAIG IFSGVPIGFS FALATFGYLG LSTFTPLEVV VGRMDEGMSH LVLLAVPLFV FLGLLIEMTG MARAMIEFLA SLVGHVHGGL SFVLIGAMYL VSGISGSKVA DMAAIAPVLF PEMKKRGASE GDLVALLATT GAQSETIPPS IVLITIGSVT GLSISALFTA GMLPGAVLAL ILCAVVWWRY RKEDLSGAQR FSKRQIGRLF IVSLPALALP FVIRMAVVEG VATATEVSTI GIAYSMLIGL LVYRRFEWRR LGRMLVDAAT LSGAILFIIG CATAMAWALT QSGFSQDLAQ VMGSMPGGAY GFLAVSIVVF VMLGSVLEGI PAIVLFGPLL FPIARLAGVH EVHYAIVVIL SMGVGLFSPP FGVGYYSACA ISKVNPDAGI RPIVGYMGAL LVGLILVAAI PWISIGFL
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