| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0109 |
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| Symbol | |
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| ID | 4009402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | + |
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| Start bp | 3253480 |
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| End bp | 3255222 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637952556 |
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| Product | putative pyruvate decarboxylase |
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| Protein accession | YP_555176 |
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| Protein GI | 91779968 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.731177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATGC AAATCGGCGC TTTTCTTGCC CGTCGGCTCA CCGAAGCCGG TGTCCGACAT
CTGTTTGGCG TACCAGGCGA CTTCAACCTG TCCTTTCTCG AACAGATCCA GGAAGCAGAC
GGGATCGAGT TTGTTGGCAA CTGCAACGAA CTGAACGCTG CCTATGCCGC CGATGGCTAC
GCTCGCACGT CCGGCATCGC AGCGCTCGTC ACAACATTTG GCGTGGGCGA CCTGGGAGCG
ATCGGCGGTA TCGCGGGTGC CTATGCGGAA AACGTGCCTG TCGTGCACAT CACCGGTACG
CCGCCGCTGC ACGCCGTCAA CAGCCGGGCG CTCGTGCATC ACACGCTCGT GAATGGCGAC
TATGACAACA TCGGGCGCTG CATGTCCGAA TTCACCGTAG CCCAGACGCG TATCACGCCC
GCCAACGCAG CCTTCGAGAT CGACCGCGTG CTGCGCTCTT GCTGGCTTGA ACGCCGTCCG
GTGCACCTGC AACTGCCTTC CGATGTCACG CACGTCGTCG TGGAGGTGCC CGAAGCGCCT
CTCATGCTCG CCGATCCCTC CAGCGATCCC CACCAGTTGC GTGAAGCCAC GCGACGCATC
GTTGAAGCCC TTGCGTCCGC ACGTTTCCCC GCCATCGTCG TGGACGCGGA CGCTGACCGC
TTTGGGGTCA CGGAACTGGT ACAGAAACTC GCCGAGAAGT GCAGCATCCC ATGCGCGTCG
CTGACGCCAG CCAAGAGTGC ACTCAACGAA ACGTCCCGGC ACTACGTGGG GACCTATGTG
GGCGCTGCCA GCGCTGAGCC GGTGCGCTCG ATCGTCGAAA ACGCGGACTG CCTGATCGGC
GTGGGCCTGC GCTTCACGGA CACGAGTACC GCGCTGTTCT CGCAGCACTT CAACCCGGAA
GCCTTCATCG ACCTGCGCCG GCACGACCTG AGTCTCGGAA CAACCCAGAT TCCAGGCGTC
ACGCTCAGGG ACGTGCTCGC CCGGGTGGTG GACGACGCAC AGCCCGTGGT CCGCGAACGT
GCAACCCAGG CTCTCGCCGC TGCTAGCGAC GCGCTACCCG CCTCATCCGG CAACGTGCCG
CTCACGCATG CCGCGCTATG GCCGCGTATC CGCCGCTTCC TGAAACCTCG CGACGTGATC
CTCGGTGAAG CGGGTACCTC ACACGCATCG CTCTCCGCGA TGAAGCTGCC GCCCGGCGCG
ACCTACATCG CACAGCCCAT CTGGGGTGCA ATCGGCTATA CGCTGCCCGC GCTGTTCGGC
TCGCTGGTCG GTACCCCTTC ACGCCGCCAT TTGCTGTTCA TCGGCGACGG CTCATTCCAG
CTCACGGCCC AGGAGCTGTC TTCCATTCTG CGCCGCGACC TGAAGCCGGT GATCTTTCTG
CTGAACAACT CGGGCTACAC GATCGAGCGG CTGATTCTCG GCGAACACTC CGCCTATAAC
GACGTCGCCA ACTGGCACTA CGCCGGACTG CCGCATGCGT TCGACCGACG CGAGCGCGCA
CTGTCTCTCG TCGTCGAGAC GGTCGCAGAT CTTGAGGCGG CGCTGAATCG GGCCGAGTCT
GCCGAGCACC TCGTGTTCAT CGAATTGAAG CTGCCGATGA TGGACGCACC GGAGTCGTTG
AAAAAGTTCG CCGATATCTT CGCAGACTTC GACTACGGCG AACGCGGGCC ACGGAACCCT
TCGAAGCTCG TAGCGTCCGA GGCCCCGGCT CATGGCCACA GCCTGACCGA CGAAACCGCC
TGA
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| Protein sequence | MRMQIGAFLA RRLTEAGVRH LFGVPGDFNL SFLEQIQEAD GIEFVGNCNE LNAAYAADGY
ARTSGIAALV TTFGVGDLGA IGGIAGAYAE NVPVVHITGT PPLHAVNSRA LVHHTLVNGD
YDNIGRCMSE FTVAQTRITP ANAAFEIDRV LRSCWLERRP VHLQLPSDVT HVVVEVPEAP
LMLADPSSDP HQLREATRRI VEALASARFP AIVVDADADR FGVTELVQKL AEKCSIPCAS
LTPAKSALNE TSRHYVGTYV GAASAEPVRS IVENADCLIG VGLRFTDTST ALFSQHFNPE
AFIDLRRHDL SLGTTQIPGV TLRDVLARVV DDAQPVVRER ATQALAAASD ALPASSGNVP
LTHAALWPRI RRFLKPRDVI LGEAGTSHAS LSAMKLPPGA TYIAQPIWGA IGYTLPALFG
SLVGTPSRRH LLFIGDGSFQ LTAQELSSIL RRDLKPVIFL LNNSGYTIER LILGEHSAYN
DVANWHYAGL PHAFDRRERA LSLVVETVAD LEAALNRAES AEHLVFIELK LPMMDAPESL
KKFADIFADF DYGERGPRNP SKLVASEAPA HGHSLTDETA
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