| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B0010 |
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| Symbol | |
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| ID | 4009501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 3349264 |
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| End bp | 3350184 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637952644 |
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| Product | putative squalene/phytoene synthase |
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| Protein accession | YP_555264 |
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| Protein GI | 91780056 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCCTG CCTTGCGGCA GGCATCAAAC TTCTTGAACG CCTTTCAGCG GGCGCCTCCA
GCGGAGATCG TCTTGGCTGT TTCCAATCTT GTCGTGGACG ATACAGAAAT CGACGCCGCT
GCCGCCACGT CCGGCAGCTC GTTCTATCTC GCCATGCGCA TTCTGCCGGC CGCGCAGCGC
GATGCGATGT ATCAGGTCTA CGCTTTCTGC CGCGCCGTCG ACGATATCGC CGACAGCGAC
ATGCCGCGCG CCGAGCGCGC CGCCGCGCTC GAACGCTGGC GTGCCGATAT CGACGCGTGC
TACGCCGGTG CGCCGCGCAC GTCGTTGCGC GCGCTGACGC GGCACATTCA TACGTTTCAT
CTGCAACGCG AAGATTTTCA CGCAATGATC GACGGCATGG CGATGGACGC CGCCGCCGAC
ATCTGCGCGC CCGACGAAGC CACGCTCGAC CTCTATTGCG ACCGCGTCGC GAGTGCGGCG
GGCCGTCTGT CGGTGAGGAT ATTCGGGATG CAGGACGAGC CTGGCCGGCT GCTTGCGCAC
CATCTGGGCC GCGCGCTGCA GCTCACCAAC ATCCTGCGCG ATATCGACGA AGACGCCGGC
ATCAACCGCT GCTATCTGCC GCACGAACTG CTCGCGCGCG AAGGCATTGC GGTGACGAGC
CCCACGCAGA TCGCTGACGA CCCCTCGCTG CCGCGCGTGT GCGCCACGCT TGCCGAGCGG
GCCAGGCAAC ACTTTGCCGC GTCCGACGCA ATCATGGACC GCGAGCCGCG CAGCCAGGTG
CGGGCGCCGC GCATCATGTC GGGCGTGTAT CGCGTGCTGC TCGAACGGAC GCTGGAGCGC
GGCTTCGACA TTCCGCGCAC CAAGGTCCGC AAGCCGAAGC TGCGCATGCT GTGGATCGTC
GCGCGTTACG CGTTCTTCTG A
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| Protein sequence | MPPALRQASN FLNAFQRAPP AEIVLAVSNL VVDDTEIDAA AATSGSSFYL AMRILPAAQR
DAMYQVYAFC RAVDDIADSD MPRAERAAAL ERWRADIDAC YAGAPRTSLR ALTRHIHTFH
LQREDFHAMI DGMAMDAAAD ICAPDEATLD LYCDRVASAA GRLSVRIFGM QDEPGRLLAH
HLGRALQLTN ILRDIDEDAG INRCYLPHEL LAREGIAVTS PTQIADDPSL PRVCATLAER
ARQHFAASDA IMDREPRSQV RAPRIMSGVY RVLLERTLER GFDIPRTKVR KPKLRMLWIV
ARYAFF
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