| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4426 |
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| Symbol | |
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| ID | 4005669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | + |
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| Start bp | 46582 |
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| End bp | 50670 |
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| Gene Length | 4089 bp |
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| Protein Length | 1362 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637945222 |
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| Product | Rhs family protein |
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| Protein accession | YP_556626 |
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| Protein GI | 91781420 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.479042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGGG GAAAACTGAC ACCGACGCAG GTTCAGAATT TTTTGAACGG AGGCTCAGGA
AATACGTTTG GCAATCCGAC TCAGAAACAA CTTCCACAGT CACAGAGGAG TATTAGTAAC
CCTGGAGGCA AGGGAGGCGT TAACTTAAAA CCCACCGATC CGGACTGGAA AGAGCACTTC
CACGAGATCA TGGATATGTT CGGCAATATA CCGGTCATAG GTAGCTTATT CAACGCGATC
AATGCGGGCG TATACCTTGC CGAGGGCAAC GTAGCGAGTG CAATGGAGAA CCTTGGCTAC
GTGGTCATGG ATCTCATTCC CGGCGCCGGC GAGCTTAAAT CGGCGGGAAA CATAGGTGAG
GATATCGGGA AGCTGGCAGA GAAAACCGGT ACCAGGCTCA CCGAGGGGGA GGCGGAAAAA
GCCGGGAAGC AGATCGCCGA GAAGCAGGCT GAGAAGCAGG CTGAGAAGCG GGCGGAAAAG
CGGGCGGAAA AGCAGGCCGG CGAGCAGGCC GAGAAGGACG GAGGCAAGGC TGAGAAGGAA
AAGCAGGAGG CGTGCAGGAA CAACAAGGGC GTCGGCCATC CGGTCAATCC GATCACCGGC
GTCAAGTTCC TGGACGGAGA GGAAGACCTG GACTTTGTGC TGCCTTGCGC CGTGCCTCTG
CACTGGCAGC GCAGCTATTT TTCGAATCTG GTGGGCAACG GCTGGCTTGG ACAAGGCTGG
TCGCTGCCGT TCTCGTTGTG TCTGAAGCGG GTCGGCTACT CGGTATTGAT GGTCGATGCG
CAAGGACACG AAACCCGTCT GCCGATGCTC GCCCCGGGCG AGCGCAAACG CATGGACAGT
ACGGGCTTCG AAGTGCACCG CGAAACGTCC GCCCGTTATC GATTCACCTC GGCCGATTGC
AGTACGCAGT ATGTGTTTGC GTCGCTCACC GTCGGCGAGT ATGACGGCGC CGGGCAGAAT
GACGGCACGC TCCCGCTCGT TGCCATCGGC GATCGTTACG GCAACCACCA GCGTCTGCTG
TATGACGAGG CCGGCATGCC CGCGCTCATC CACGACGCTG GCGGCCGCGT GCTGCGGTTG
CAATTCACCG CGCTGCCCGT GGACGAAGGT GGAACCGTGC AGCGGTTGCA GCGCGTGGTG
CTGGGAAGTC AAGCACTGGT CTCGTATGAG TACTCGCCCG AGGGTGATCT GGTGCGCGTG
CGTGATGCCG ACGGACAGGC CACGCGCGAA TACCGCTACA ACAATCACAT TCTGATCGAA
CATAGCCAGC CCGGTGCGCT GATCGCACGC TACGAATACG ACCAGTACAC GTTGGACGGC
AAGGTGTTGC GGCTCGAGAA CAACCTCGGA CAGACCTGGC AGTTCCGCTA TCTGCCCAGC
CGGACGGAAG TGACCGATGC GCTCGGACAG ACGCGGTGCT ATCTGTTCAA TGACCAGAAG
ATGATGGTGG GCCAGATCGA TGCCGCCGGC AACGCGACGC GTATCGATGT CGATGGACAG
GGCAATCCGC TGCGCGTCAC CGACCCGGCC GGCGGCGTAC GTCTTGCCAC TTACGACGCA
CGCGGGAACA TGACCTCGCT CACCGACGCA GCCGGCCGAC GCACCGAGAT CCAGTACCAT
CCGCAATGGC AGCGGCCCAC GCTCATCGTC GATGCGATGG GCGCGGCAAC GCGCGTTGCC
TACGATGCAG CGGGCAACCT GATTCGCAGG ACAAACGCGC TGGGGCACGT CACCGGGTAC
GCTTACGACG ATGACGGACG CGTCATTCGC ATCACCGATG CGCACGGCAA GCACCGGCAC
TTCGCGTACG ACGTTCATGG CCGGCTCACG AGTCATATCG ATTGCTCTGG ACGGGCAACC
CACTACGGTT GGGATGACTG GGGACATCTG GCGTTGGTGA CTAACGCCGC AGGCGAAACG
ACGCGCTATT GGCGAAATCG CAGGGGACGC CTGCTTAGGA CCCGTCACGC CGACGGCACC
GGCGAGGAAT TCACTTACGA TATTCACGGT CGCCTGATTG CGCACACCGA TGCGCACGGG
GCCAGCACGC AATGGGAGCG GGCCGCCGAT GGCCTGCCGG TGACGCGTAT CGATGCGCTG
GGGCACTGTC TGCGCTACGA GTATGATGCG GCGCGCCGCT TGCAAACGCT GACCAATGAA
AACGGCGCGC CGTACCGCTT CACCTACGAT ACGGCCGGCC GTCTGGTCGA GCAACAGGGT
TTCGACGGGC GTCTGATCCG TTACCGCTAC GACGCGGCCG GATGGTTGAC GGAGCAGATC
GAACTGGGCG CGTACGAAGA TCACGCGGCC GCCGACGGCA ACCATCCCGA TACCTTGCGT
ACCACGTATG AGCGGGACAA GGCCGGACGC ATCACCGCGA CAACGATAAG CCGCGCGGGC
GACGAACGTA CCGAGCGCAT CACATGGCGG TATGACGCAG CCGGTCGGCT GATTGAGGCG
AGCAACGATT GCTGCCGTCT TGAGCGCGGC TACGATGCGG TGGGCCGACT GAGCAGCGAA
ACCAGCCATG TCGCGGGCCG GTCGCTGACG GTGAGCTACG AGCATGACGC GTTGGGCAAT
CACATCAGAA CGACGTTGCC GGACGGCCGC CACATCGACT ACCTCTACTA TGGTTCTGGG
CATTTGCACC AGATCAGCAT CGACGGCGAA GTGATCAGCG ATATCGAACG CGATGCGCTG
CATCGGGAAG TGAGCCGCAC GCAGGGGGAA CTCGTCAGTC ACTATCAATA TGACCTTCAG
GGTCGGCACA TTGGACAGCA AACAATGGGT CGCGCCGTGT CCGGGCATTC GGCGATCACG
CTCATCTCAC GCACGTATCG GTATGACGAG GTGGGTAATG TTCGCGAGAT GACGGATCGG
CAGTCCGGTG TGCATCGCTA CCGGTACGAT CCGCTCGGAC AACTGATCGA ATCAGAGCAC
GAGACTTTTG CCCTCGATCC CGCGCACAAC ATCCTGGATT CGAGGGATCT TTCGCCGGTC
GTCGGCAATC GGGTTATGCA GTTTGGACAA CACCGCTATG TCTACGATAT GCATGGCAAT
GTTGTCGAAA AGATCAGCGG CGCGCACACG CGCATCCGTC TCGACTATTC GCCGGCTCAT
CGAATCGAAC GTGCGCGGGT CGCCCGCAAC GGCACCGAAG AGCGAGTGGA ATATGGCTAC
GACGCACTAG GCCGACGCGT GTTCAGGAAG AACGCATCGG GCATCACGCT GTTCGTGTGG
GAGGGCAATC GCCTGCTGAG TGAAGTGCGG GACGATCGCA CGTTTGTCTA CGTCTATGCA
CACAACAGTT TTGTGCCCGT CGCACAGATC GAGTCGCGTA ATGCTCAGAA CGGCCGGGCA
CGTGATGATC TGCCCATTCG TTACTACCAC ACCGATCAGA TCGGCTTGCC TTACGAGTCG
ACGGACGACG CTGGACGGAC GCAATGGCGC GCGCGCTACG CGGCATGGGG CAGGTTGCTG
GGAGCGAATG GCGGTCATGA GCAGATGCAT GAGTCCGGCA GGCAGGCTCA CCAGCCGCTG
CGGTTCCAGG GGCAATACTT CGACGAAGAA ACCGGCCTGC ACTATAACCG GCACCGATAT
TACGATCCGG ACGCCGGGCG TTTCATGACG CAGGACCCGA TCGGGCTGAG AGGGGGCATC
AACCTGTATC GTTACGCACC CAACCCCGGG CGATGGATTG ATCCGTTGGG GCTTGCGGTG
GATCTTTCGC TAGTGGGCCC TCACTACGCA TGCAACCTGA ACAATTTTCC TAATACGTTC
CAGGTGTTAG GTCATGGCTC GCCAGGGGGC AACATAGCGG ACCTGTCTGG CGAAACCCTC
ACGCCGAGTG AATTGGGCGA CTATATGAGA GAAGCGTCGA ACTACAGGCA GGGGCAGCCT
GTGACGCTTT ATGCTTGCCA CCTAGGCGCA GGCGGAAAAA ACTCCTATGC CCAGCAACTG
TCCAATTACC TTGGCGCGGA CGTGAATGCG CCGACAGATG TATTGAAGAC CATCGACCTT
GGAGACGGAG ACGTCATGGC CCTTGTCGCT AACGGCGGAG GATGGCAGAA ATTTTCGCCG
ATTTGCTAG
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| Protein sequence | MPRGKLTPTQ VQNFLNGGSG NTFGNPTQKQ LPQSQRSISN PGGKGGVNLK PTDPDWKEHF
HEIMDMFGNI PVIGSLFNAI NAGVYLAEGN VASAMENLGY VVMDLIPGAG ELKSAGNIGE
DIGKLAEKTG TRLTEGEAEK AGKQIAEKQA EKQAEKRAEK RAEKQAGEQA EKDGGKAEKE
KQEACRNNKG VGHPVNPITG VKFLDGEEDL DFVLPCAVPL HWQRSYFSNL VGNGWLGQGW
SLPFSLCLKR VGYSVLMVDA QGHETRLPML APGERKRMDS TGFEVHRETS ARYRFTSADC
STQYVFASLT VGEYDGAGQN DGTLPLVAIG DRYGNHQRLL YDEAGMPALI HDAGGRVLRL
QFTALPVDEG GTVQRLQRVV LGSQALVSYE YSPEGDLVRV RDADGQATRE YRYNNHILIE
HSQPGALIAR YEYDQYTLDG KVLRLENNLG QTWQFRYLPS RTEVTDALGQ TRCYLFNDQK
MMVGQIDAAG NATRIDVDGQ GNPLRVTDPA GGVRLATYDA RGNMTSLTDA AGRRTEIQYH
PQWQRPTLIV DAMGAATRVA YDAAGNLIRR TNALGHVTGY AYDDDGRVIR ITDAHGKHRH
FAYDVHGRLT SHIDCSGRAT HYGWDDWGHL ALVTNAAGET TRYWRNRRGR LLRTRHADGT
GEEFTYDIHG RLIAHTDAHG ASTQWERAAD GLPVTRIDAL GHCLRYEYDA ARRLQTLTNE
NGAPYRFTYD TAGRLVEQQG FDGRLIRYRY DAAGWLTEQI ELGAYEDHAA ADGNHPDTLR
TTYERDKAGR ITATTISRAG DERTERITWR YDAAGRLIEA SNDCCRLERG YDAVGRLSSE
TSHVAGRSLT VSYEHDALGN HIRTTLPDGR HIDYLYYGSG HLHQISIDGE VISDIERDAL
HREVSRTQGE LVSHYQYDLQ GRHIGQQTMG RAVSGHSAIT LISRTYRYDE VGNVREMTDR
QSGVHRYRYD PLGQLIESEH ETFALDPAHN ILDSRDLSPV VGNRVMQFGQ HRYVYDMHGN
VVEKISGAHT RIRLDYSPAH RIERARVARN GTEERVEYGY DALGRRVFRK NASGITLFVW
EGNRLLSEVR DDRTFVYVYA HNSFVPVAQI ESRNAQNGRA RDDLPIRYYH TDQIGLPYES
TDDAGRTQWR ARYAAWGRLL GANGGHEQMH ESGRQAHQPL RFQGQYFDEE TGLHYNRHRY
YDPDAGRFMT QDPIGLRGGI NLYRYAPNPG RWIDPLGLAV DLSLVGPHYA CNLNNFPNTF
QVLGHGSPGG NIADLSGETL TPSELGDYMR EASNYRQGQP VTLYACHLGA GGKNSYAQQL
SNYLGADVNA PTDVLKTIDL GDGDVMALVA NGGGWQKFSP IC
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