| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4283 |
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| Symbol | |
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| ID | 4004215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007951 |
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| Strand | - |
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| Start bp | 208929 |
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| End bp | 210779 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637945367 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_556768 |
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| Protein GI | 91781562 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.188884 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCTA GCCCGCCCTC CCGATCCGCC GCGCCGCGCA TCGAGGAACT GATAGCCCGG
CGCGATCTGT CCGCCGTTTT CCAGCCAATC ATCGATTTCG AAGACGGCGC GATCCTCGGC
TACGAAGGTC TGATTCGCGG GCCGGCGGGC ACGCCGCTCG AAGCACCGTT CGCGCTGTTT
TCGCAAGCGC TCGCCGAGGG CTGCGGCATC GCACTCGAAC GCGCCGCCGC GCGCACCTGC
ATCGAAGCGT TCGCGCGGCT CGAATTCGAC GGCAAGCTGT TTCTGAATTT CAGCGCGGGC
GCACTCCGCC AACTGGCCGG GACGCGCGAT GAAACGCTAG CGCTCCTGCG TCATCACGGC
GTCGATCCGC AGCGGCTGGT AATCGAGCTG ACGGAGCAAA GCACGATTCC CGACGTGGGC
AGTTTCCTGC CCGTGATCGC GGCGCTGCGC AGTGACGGCG CGCAATTCGC GCTCGACGAT
TACGGCACCG CGAACGCCAG CATGAACCTG TGGGTGCGGT TGCAGCCGGA CGTCGTGAAG
ATCGACCGCT TCTTCATTCA CGACATTGCC TGCGACCCGC TCAAGTTCGA AGCCGTGCGC
GCCATGCAGC ACTTCGCCAG CGCAAGCGGT GCGCGGCTCG TGGCCGAGGG CATCGAAAAC
GAAGCGGACC TGATCGTGGT GCGCGACATG GGGATCGGCT GCGGTCAGGG GTTTTTCTTC
GGCCGTCCGC ACGCGCAGCC GGCCCGCAAG GTGACCGACG ACGCCCGCGA CGCGCTTCGC
GCCGGCCACA TCGCGGTGTT TCCCGAAACC ACGCGCACGG TGAGCAGTGC GTCGCCTTCG
GGCGGCATGG CGTCGGCGAA AATGCTGGTG CACGCGCCCG CGCTGCCGCG CCAGGCCACC
AATAACGACG TGCTCGAACT GTTCAACCGT CTGCCCGACC TGCACGCGGT CGCGGTGGTC
GAGCACGACG AGCCGGTCGC GCTGATCAAC CGCCGCAGTT TCATGGACCG CTACGCGCTG
CCGTATCACC GGGAACTGTT CGGCAAGCGC CCTTGCCTGC TGTTCGCCAA CGCGTCGCCG
GTCATCATCG AAAAATCGAT GACGGTCGAG CAGATGGCCA AGCTCCTCGC GAGCGACGAT
CAGCGCTATC TCGCCGATGG CTTCGTCATC ACCGACAACG GCAAATACGC CGGCCTCGGC
ACCGGCGAAA ACCTCGTGCG CGCGGTGACC GAGGTGCGCA TCGAAGCGGC GCGCTACGCG
AATCCGCTGA CCTTCCTGCC GGGCAATATC CCGATCAGTT CGCACATTGC CCGCCTGCTC
GGCAACGACG CCGGTTTCTA CGCGTGCTAC GTCGATCTGA ATCACTTCAA GCCGTTCAAC
GATCAATACG GCTACTGGCA AGGCGACGAA GTGTTGAAAT TCGCGGCCCT CGTGCTCGCC
GACGTGTGCG ACCCGACCCG CGACTTCCTC GGACACGTGG GCGGCGACGA CTTCCTGATT
CTGTTCCAGA GCGAAGACTG GCGCGAACGC GTGCTGCGCG CGATCCACGT ATTCAACGAG
GGCGCGCAGC GCTTTTACGC GCCGGCCGAC CGGCTCGCCG GCGGTATTCA CGGCGAGGAC
CGGCGCGGCA ATCCGACCTT CTTCGGTTTC GTGACGATGG CGATCGGCTG CGTGCACGTC
GAGCCCGGCG AGGGACCGTC GCTCTATACC AGCGAGGAAA TCGCCTCCGT TGCGGCACTG
GCCAAGCGGC GCGCGAAACA CGAGGCGAGC GGTTTCGTGC TGATCGACGC GGACGAGAGC
GTGGCGTTAC TGCGTGGACA AGCAGAAGCC GTGCATGTCT CGCTAGAGTG A
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| Protein sequence | MQPSPPSRSA APRIEELIAR RDLSAVFQPI IDFEDGAILG YEGLIRGPAG TPLEAPFALF
SQALAEGCGI ALERAAARTC IEAFARLEFD GKLFLNFSAG ALRQLAGTRD ETLALLRHHG
VDPQRLVIEL TEQSTIPDVG SFLPVIAALR SDGAQFALDD YGTANASMNL WVRLQPDVVK
IDRFFIHDIA CDPLKFEAVR AMQHFASASG ARLVAEGIEN EADLIVVRDM GIGCGQGFFF
GRPHAQPARK VTDDARDALR AGHIAVFPET TRTVSSASPS GGMASAKMLV HAPALPRQAT
NNDVLELFNR LPDLHAVAVV EHDEPVALIN RRSFMDRYAL PYHRELFGKR PCLLFANASP
VIIEKSMTVE QMAKLLASDD QRYLADGFVI TDNGKYAGLG TGENLVRAVT EVRIEAARYA
NPLTFLPGNI PISSHIARLL GNDAGFYACY VDLNHFKPFN DQYGYWQGDE VLKFAALVLA
DVCDPTRDFL GHVGGDDFLI LFQSEDWRER VLRAIHVFNE GAQRFYAPAD RLAGGIHGED
RRGNPTFFGF VTMAIGCVHV EPGEGPSLYT SEEIASVAAL AKRRAKHEAS GFVLIDADES
VALLRGQAEA VHVSLE
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