Gene Bxe_A4117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A4117 
Symbol 
ID4005035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp378425 
End bp379408 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content67% 
IMG OID637945535 
ProductKpsF/GutQ 
Protein accessionYP_556935 
Protein GI91781729 
COG category[T] Signal transduction mechanisms
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID[TIGR00393] KpsF/GutQ family protein 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCGA AAATCAATGG CGACCGGGCA CTCGCGCTCG CTCGCGACGT GCTCGACATC 
GAAGCGGACG CCGTGCGCGC GCTTCGCGAT CAACTCGACG ACGGTTTCGT CGGGGCGGTC
GACTTCATCC TGGGTTGCCG CGGGCGCGTT GTCGTTTCCG GCATCGGCAA ATCCGGCCAC
GTGGCCCGCA AGCTCGCGGC TACGCTCGCC AGCACCGGCA CGCCGGCGTT CTTCGTGCAC
CCCGCGGAAG CCAGTCATGG CGACCTCGGC ATGGTCACCG CCGAAGACGT GTTCATCGCC
CTGTCCAACT CCGGTGAAAC CGAAGAACTG ATGGCGATCC TGCCGCTCAT CAAGCGGCTC
GGCGCGAAGC TGATTGCAAT GACAGGCCGT CCGTCTTCGA GTCTCGCACA ACTGGCCGAC
GTGCACCTGA ATTCCGGCGT CGCGAAAGAG GCCTGCCCGA TGAACCTCGC GCCCACCGCC
AGCACGACCG CCGCGCTCGC GCTCGGCGAC GCGCTCGCGC TCGCGGTGCT CGACGCGCGT
GGCTTCGGCC GCGACGACTT CGCCCGCTCG CATCCGGGCG GCGCGCTCGG CCGGCGTCTG
CTCACTTATG TACGCGACGT GATGCGCACC GGCGACGATC TGCCGAAGGT CACACCCGAG
GCCACCGTGC GCGACGCGCT GTTCCAGCTG ACCGCCAAGC GCATGGGCAT GACCGCGATC
GTCGATCACG ACGATCACGT GGCCGGCATT TTCACCGACG GCGACCTGCG CCGCGTGCTC
GAACGCGAGG GCGATTTCCG TCAGTTGCCG ATCGCCTCCG TGATGACCGC CGGCCCGCGC
ACCATCGGCC CGGATCAACT GGCGGTCGAA GCCGTGGAAC TGATGGAGCG CCACCGCATC
AATCAGATGC TGGTCGTGGA CGAAGCAGGC AAGCTGATCG GCGCACTCAA CATGCACGAC
CTGTTCTCGA AGAAGGTGAT CTGA
 
Protein sequence
MIAKINGDRA LALARDVLDI EADAVRALRD QLDDGFVGAV DFILGCRGRV VVSGIGKSGH 
VARKLAATLA STGTPAFFVH PAEASHGDLG MVTAEDVFIA LSNSGETEEL MAILPLIKRL
GAKLIAMTGR PSSSLAQLAD VHLNSGVAKE ACPMNLAPTA STTAALALGD ALALAVLDAR
GFGRDDFARS HPGGALGRRL LTYVRDVMRT GDDLPKVTPE ATVRDALFQL TAKRMGMTAI
VDHDDHVAGI FTDGDLRRVL EREGDFRQLP IASVMTAGPR TIGPDQLAVE AVELMERHRI
NQMLVVDEAG KLIGALNMHD LFSKKVI