| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A4043 |
|---|
| Symbol | aspS |
|---|
| ID | 4002226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 464088 |
|---|
| End bp | 465887 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637945608 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_557008 |
|---|
| Protein GI | 91781802 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0426746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.173389 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATGA GATCTGAATA CTGCGGTCTG GTGACCGAAG AACTGCTGGG CCAATCCGTC
TCGCTGTGCG GCTGGGTGAG CCGCCGCCGC GACCACGGCG GCGTCATCTT CATCGACCTG
CGCGATCGCG AAGGCCTCGT TCAGGTCGTC TGCGACCCGG ACCGCGCGGA GATGTTCAAG
GCGGCCGAAG GCGTGCGCAA CGAGTTCTGC CTGCAGATCA AGGGCGTGGT TCGCGCCCGT
CCGGAAGGCA CCACGAACGC TGCGCTGAAG AGCGGCAAGA TCGAAGTGCT GTGCCACGAG
CTGATCGTGC TGAACCCGTC GATCACGCCG CCGTTCCAGC TCGACGACGA CAACCTGTCG
GAAACCACGC GCCTCACGCA CCGCGTGCTG GACCTGCGCC GTCCGCAGAT GCAGCACAAC
CTGCGTCTGC GTTACCGCGT CGCGATCGAA GTGCGCAAGT ACCTGGACGC GCAAGGCTTC
ATCGACATCG AAACGCCGAT GCTCACCAAG AGCACGCCGG AAGGCGCGCG CGACTACCTG
GTGCCGTCGC GTACGAACCC GGGCCAGTTC TTCGCGCTGC CGCAATCGCC GCAGCTGTTC
AAGCAGTTGC TGATGGTGGC GAACTTCGAT CGCTACTACC AGATCGTCAA GTGCTTCCGC
GACGAAGATC TGCGCGCCGA CCGTCAGCCG GAATTCACGC AGATCGACTG CGAAACCTCG
TTCCTGTCGG AACAGGAAAT CCGCGATCTG TTCGAAGCGA TGATCCGTCA CGTGTTCAAG
GAAACGATCG GCGTCACGCT GGACGAGAAA TTCCCGGTCA TGCTGTATTC GGAAGCCATG
CGCCGCTTCG GTTCGGACAA GCCGGACCTG CGCGTGAAGC TCGAATTCAC GGACCTCACG
GACGCCGTTC GCGACGTCGA CTTCAAGGTG TTCAGCACGC CGGCCAACAC GAAAGACGGC
CGTGTCGCGG CGATTCGCGT GCCGAAGGGC GGCGAGCTCT CGCGTGGCGA CATCGACAGC
TACACGGAAT TCGTGCGCAT CTACGGTGCG AAGGGTCTGG CGTGGATCAA GGTCAACGAA
GTCGCGAAGG GCCGTGACGG TCTGCAAAGC CCGATCGTCA AGAACCTGCA CGACGAAGCG
GTGAAGGCGA TCATCGAGCG CACCGGCGCG CAGGACGGCG ACATCATTTT CTTCGCGGCG
GATCGCGCGA AAGTGGTGAA CGACAGCCTC GGCGCGCTGC GTCTGAAGAT CGGTCATTCG
GAATTCGGCA AGGCCAATGG TCTGGTGGAA AGCGGCTGGA AGCCGCTGTG GGTGATCGAC
TTCCCCATGT TCGAATACGA CGAGGAAGAC AACCGCTACG TCGCCGCGCA TCACCCGTTC
ACGAGCCCGA AAGACGAGCA CCTCGAGTAT CTGGAAACGG ATCCGGCGCG CTGCCTCGCG
AAGGCCTACG ACATGGTGCT GAACGGCTGG GAAATCGGCG GCGGTTCGGT GCGTATCCAC
CGTGAAGAAG TGCAGAGCAA GGTGTTCCGC GCGCTGAAGA TCAACGCGGA AGAAGCGCAG
GCCAAGTTCG GCTTCCTGCT CGACGCGCTG CAATACGGCG CGCCGCCGCA CGGCGGTATC
GCATTTGGTC TCGACCGCAT CGTCACGATG ATGGCCGGCG CCGATTCGAT CCGCGACGTG
ATCGCGTTCC CGAAAACGCA GCGCGCGCAG TGTCTGCTGA CGCAGGCGCC GAGCGAAGTG
GACGAGCGCC AGTTGCGCGA GTTGCACATT CGTCTGCGCC AGCCGGAACC GAAGGCGTAA
|
|---|
| Protein sequence | MSMRSEYCGL VTEELLGQSV SLCGWVSRRR DHGGVIFIDL RDREGLVQVV CDPDRAEMFK
AAEGVRNEFC LQIKGVVRAR PEGTTNAALK SGKIEVLCHE LIVLNPSITP PFQLDDDNLS
ETTRLTHRVL DLRRPQMQHN LRLRYRVAIE VRKYLDAQGF IDIETPMLTK STPEGARDYL
VPSRTNPGQF FALPQSPQLF KQLLMVANFD RYYQIVKCFR DEDLRADRQP EFTQIDCETS
FLSEQEIRDL FEAMIRHVFK ETIGVTLDEK FPVMLYSEAM RRFGSDKPDL RVKLEFTDLT
DAVRDVDFKV FSTPANTKDG RVAAIRVPKG GELSRGDIDS YTEFVRIYGA KGLAWIKVNE
VAKGRDGLQS PIVKNLHDEA VKAIIERTGA QDGDIIFFAA DRAKVVNDSL GALRLKIGHS
EFGKANGLVE SGWKPLWVID FPMFEYDEED NRYVAAHHPF TSPKDEHLEY LETDPARCLA
KAYDMVLNGW EIGGGSVRIH REEVQSKVFR ALKINAEEAQ AKFGFLLDAL QYGAPPHGGI
AFGLDRIVTM MAGADSIRDV IAFPKTQRAQ CLLTQAPSEV DERQLRELHI RLRQPEPKA
|
|---|
| |