Gene Bxe_A3918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A3918 
Symbol 
ID4001908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp610629 
End bp611075 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content61% 
IMG OID637945732 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_557131 
Protein GI91781925 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.833668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0813936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCT CTCGTTCCTC CAGCATGCGC GGCAGCCGCT CGCGCCGCGC GATGGCCGAC 
ATCAACGTCG TGCCGTATAT CGACGTGATG CTCGTGCTGC TCGTGATCTT CATGGTGACC
GCGCCGCTCG TTGCTCCGTC GATCGTCAAT CTGCCGACCG TCGGTGGCGC AGCGCCGCAG
CAGCAAACGC CGCCCGTCAT CGTGAACATT CGCGCGGACG GCAACATGAG CGTCAAATAC
AAGGACGATT CGGGTGCGCA GCAGCAGGAA GACATGACCA AGGCCGATCT GAACAGCTTC
ATCGCCGAGC GCGCGCAATC GCATCCTGAT CAGCCCGTCG TGATCGCCGC CGACAAAACG
GTCAAGTACG AAGTCGTGAT GAATGTGATG TCCGAACTGA AAGCTCGCGG CGTCAAGCGC
GTTGGATTGC TCGTCAAATC GCAATGA
 
Protein sequence
MAGSRSSSMR GSRSRRAMAD INVVPYIDVM LVLLVIFMVT APLVAPSIVN LPTVGGAAPQ 
QQTPPVIVNI RADGNMSVKY KDDSGAQQQE DMTKADLNSF IAERAQSHPD QPVVIAADKT
VKYEVVMNVM SELKARGVKR VGLLVKSQ