Gene Bxe_A3583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_A3583 
Symbol 
ID4002687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007951 
Strand
Start bp974518 
End bp975780 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content66% 
IMG OID637946059 
Productmajor facilitator superfamily efflux pump membrane fusion protein 
Protein accessionYP_557458 
Protein GI91782252 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR00998] efflux pump membrane protein (multidrug resistance protein A) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0766049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CCCAAAAGCC CGCGGCTGCT ACACAGCCGA CTCAGCCGGC CCCGCAGCCG 
AGGCAACCGG CCCAACCGCC GGCGAACAAC GGCAAACGCA AGCGCACGAT GACGCTGCTC
GTCATCGTGA TCCTGATCGC CGCGCTCGCC TACGGCCTGT ACTACTTCCT CGTCGCGCGC
TTCCACGAAG ACACCGACGA CGCGTACGTG AGCGGCAACG TCGTGCAGAT CACGCCGCAA
GTCACGGGCA CCGTGGTCGC CGTGAACGCG GACGACACGC AAGTGGTCAA GGCGGGCGAT
CCGCTCATCG TACTCGATCC GGCCGACGCA CGCGTGGCGC TCGAGCAGGC CGAGGCGAAT
CTCGCGCAAA CGGTACGCCA GGTGCGCGGC CTGTTCGCCG ACGACAACCA GTACCAGGCG
CAAGTCGCAC TGCGTCAGTC CGATCTGTCG CGCGCCCAGG ACGACCTGAA GCGCCGTCTG
ACGGTCGCGC AAACCGGCGC GGTATCGCAG GAAGAAATCT CGCACGCCCG CGACGCGGTG
AAGAGCGCGC AAGCCGCCGT CGACGCCGCC CAGCAGCAAC TGGAGTCGAA CCGCGCGCTG
ACCGCCAACA CCACGATCGC GAACCATCCG AACGTGCAGG CCGCCGCCGC GAAGGTCCGC
GACGCGTACC TGAACCACGC GCGCAACGTT CTGCCTGCGC CGGTGACCGG CTACGTCGCA
AAACGCTCGG TGCAGGTCGG CCAGCGCGTC TCGCCCGGCA CCCCGTTGAT GGCCATCGTG
CCGCTTCACG ACGCGTGGGT CGACGCGAAT TTCAAGGAAG TGCAGCTCAA GCACATGCGC
ATCGGTCAGC CGGTGGAACT GACAGCCGAC GTGTACGGCT CGTCGGTGCC GTATCACGGC
AAGGTGGTCG GCTTCTCGGC GGGCACGGGT TCGGCGTTCT CGCTGCTGCC CGCGCAAAAC
GCCACCGGCA ACTGGATCAA GGTGGTGCAG CGTCTGCCGG TGCGTATCGC GCTCGATCCG
CAGGAACTCG ACAAACACCC GCTGCGCATC GGCCTGTCGA TGCAAGCCGA CGTGAACATC
AAGGACGACA CCGGCGGCCA GCTCGGCCAG GCGCCGAACA CGGCCTACCA GACCAACGTC
TTCGATAAAT ACGGCGACGA AGCCGACGCG GAAATCGCTC GCATCATCGC GGAAAACGCC
GGGCTCGAGA CCACAACACA GAGAGTCGAA CACCAAAAAA ATCCCGGCCA GAAGCCACTG
TAA
 
Protein sequence
MSTTQKPAAA TQPTQPAPQP RQPAQPPANN GKRKRTMTLL VIVILIAALA YGLYYFLVAR 
FHEDTDDAYV SGNVVQITPQ VTGTVVAVNA DDTQVVKAGD PLIVLDPADA RVALEQAEAN
LAQTVRQVRG LFADDNQYQA QVALRQSDLS RAQDDLKRRL TVAQTGAVSQ EEISHARDAV
KSAQAAVDAA QQQLESNRAL TANTTIANHP NVQAAAAKVR DAYLNHARNV LPAPVTGYVA
KRSVQVGQRV SPGTPLMAIV PLHDAWVDAN FKEVQLKHMR IGQPVELTAD VYGSSVPYHG
KVVGFSAGTG SAFSLLPAQN ATGNWIKVVQ RLPVRIALDP QELDKHPLRI GLSMQADVNI
KDDTGGQLGQ APNTAYQTNV FDKYGDEADA EIARIIAENA GLETTTQRVE HQKNPGQKPL