| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3354 |
|---|
| Symbol | |
|---|
| ID | 4002432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 1229362 |
|---|
| End bp | 1230618 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637946285 |
|---|
| Product | C-5 cytosine-specific DNA methylase |
|---|
| Protein accession | YP_557683 |
|---|
| Protein GI | 91782477 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGG CCGCTCCGCA CGGACTGCTC AAGCAGACCT TGCAGTTCTA TAGTCAAGGA
GAGATCGCCG CCCACTGTGG AAGAAACGTC AGAACTATCC GTCGCTGGGA AGCCAGTGGA
AATTGCCCCG TGATCGCGGA AGCCACGCTG CGGGAAATGC TCGATATCAG GACTCGCAAG
GCGCCGGTCG AGCGGGCACC CGAATTTCGC CTCGTCGACC TCTTTGCCGG AATCGGCGGT
ATTCGCCGCG GATTCGAAGC GCACGGCGGA CGGTGTGTCT TCACGAGCGA ATGGAACGAC
TTCTCGAAGA AGACCTATCA GGAAAATTAC CGTGATTGCG ACGACGCCCA TCAGTTCGTG
GGTGACATCG TTTCGTTCGA CGTCGCTTCC GTGCCATCAC ACGACGTGCT GCTTGCCGGG
TTTCCGTGTC AGCCCTTCAG CATCGCGGGC GTGAGCAAGA AAAATTCGCT CGGCCGTCCG
CACGGCTTCG AATGCACGAC ACAAGGCACG CTCTTTTACG ACGTTGCACG CATCATCGCG
GCGAAGCGCC CGGCTGCCTT CCTGCTGGAG AACGTCAAGA ATCTGCTGTC GCACGATAAA
GGCAAAACCT TCCAGACCAT CATCGACGTG CTGCGTGATG AACTCAAATA CGACGTCCAT
TACAAGGTTA TCGACGGTCA ATACTTCACG CCGCAACATC GGGAACGCAT CGTGATCGTC
GGTTTTCGCG AGGAGACCGA ATTTACGTTC GACGACCTGA ACGTGCCGGC CGAAGGACCA
CGCCTTGCTT CGATTCTGCA CAAGACCGAC GGCAGCGAAC CGGTGCTGGC GCATGACGGC
GACCGTTTCT TCGATCACGC GTCTCGCGAG GTGCAACCCA GGTACACGCT CACTGCGAAC
CTGTGGGCCT ATCTTCAAGC TTACGCGGCC AAGCATCGGG CGGCGGGCAA CGGTTTCGGG
TTCGGGCTGG TCACGCCCGA CAGCGTGACG CGCACGCTGT CGGCCCGATA TTTCAAGGAC
GGCTCGGAGA TCTTATGCTC GCAAGGCAAA GGCAAGCGTC CGCGCCGTTT GACGCCGCGC
GAGTGCGCCC GGCTAATGGG TTTTCCTGAC GACTTCGTGA TTCCGGTGAG CGACACGCAA
GCCTATCGCC AGTTCGGCAA TAGCGTGGTG GTTCCGGTCA TGCAGGAAGT CGCACGAATC
ATGATTCCGC ACGTGAAGGG ACTGCTGGCG CAAAAAGTTG CCGGCGCAAC CAGTTGA
|
|---|
| Protein sequence | MKTAAPHGLL KQTLQFYSQG EIAAHCGRNV RTIRRWEASG NCPVIAEATL REMLDIRTRK
APVERAPEFR LVDLFAGIGG IRRGFEAHGG RCVFTSEWND FSKKTYQENY RDCDDAHQFV
GDIVSFDVAS VPSHDVLLAG FPCQPFSIAG VSKKNSLGRP HGFECTTQGT LFYDVARIIA
AKRPAAFLLE NVKNLLSHDK GKTFQTIIDV LRDELKYDVH YKVIDGQYFT PQHRERIVIV
GFREETEFTF DDLNVPAEGP RLASILHKTD GSEPVLAHDG DRFFDHASRE VQPRYTLTAN
LWAYLQAYAA KHRAAGNGFG FGLVTPDSVT RTLSARYFKD GSEILCSQGK GKRPRRLTPR
ECARLMGFPD DFVIPVSDTQ AYRQFGNSVV VPVMQEVARI MIPHVKGLLA QKVAGATS
|
|---|
| |