| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A3163 |
|---|
| Symbol | |
|---|
| ID | 4002735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | - |
|---|
| Start bp | 1443457 |
|---|
| End bp | 1444377 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637946477 |
|---|
| Product | NAD dependent epimerase/dehydratase |
|---|
| Protein accession | YP_557868 |
|---|
| Protein GI | 91782662 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
|---|
| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.531544 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAG TTGCCGTCAT CGGCGCCTCC GGGCTGCTCG GCCGCGCGCT CGCAGACGAA
CTGGCACAGC AGCCCGGCTG GCAAGTCGCG GCCACGGCGT TCAGCCGGCC GGCGCCAGGC
AGGATCGCGC TGGATATTCG CGACGCGCAG GCGGTCGAGC AGTTCGTCGA GCGCGAAGCA
CCGGATGCGC TCGTGATTGC CGCGGCGGAG CGCCGACCGG ACGTGTGCGA GCACGATCCC
GCGCTGGCCC GCGCACTGAA CGTCGATGCC GTGCGCACGC TTGCCGCGGC GGCGAACCGG
CGCGGCGCAT GGACGCTGTC GATCTCCACG GATTACGTGT TCGACGGCAC ACACCCGCCC
TACCAGCACG ATTCCGTGCC CGCGCCGCTC AATGCCTATG GGCACAGCAA GCTCGAAGGC
GAGCGCGCGC TGACGGAATC GACCGACCTG GGCTGCGTGC TGCGTTTGCC GCTGCTGTAC
GGGCCGATCG TCAGTTGGGC CGAGTCGGCC GTGACGAGTC TCGTGCCGGC GATCGCCGCG
TCGGCTGCGC CGGCTGGTCA ACCCGCCGTC ATGGATGCAT GGGCGATCCG TTATCCCACC
TTCACGCCGG ACGTCGCGTT CGTGATCCGG CAGATGCTCG AACTGCATGC GCGCGGCGAC
GCGATTCGCG GCATCGTGCA ATGGTCGGGC GACGAACCGA TGAACAAGTA CGAGATCGCC
GTGCGCCTTG CCGAAGCGTT GCAACTCGAC GCGCATCTGA CACCGCAACG CACGCCGACC
GATGCGACGC CGCGCCCGCA TAACTGCCAC CTCGCTTCGA CCCGGCTCGA AGCGCTCGGG
ATCGGCCGCC GTACACCGTT CGATACGGCG ATCCGGCAAG TGTTAGCCGC GTTCCCGTGG
CGCGGTGCCG CGCAGGCGTA G
|
|---|
| Protein sequence | MFKVAVIGAS GLLGRALADE LAQQPGWQVA ATAFSRPAPG RIALDIRDAQ AVEQFVEREA
PDALVIAAAE RRPDVCEHDP ALARALNVDA VRTLAAAANR RGAWTLSIST DYVFDGTHPP
YQHDSVPAPL NAYGHSKLEG ERALTESTDL GCVLRLPLLY GPIVSWAESA VTSLVPAIAA
SAAPAGQPAV MDAWAIRYPT FTPDVAFVIR QMLELHARGD AIRGIVQWSG DEPMNKYEIA
VRLAEALQLD AHLTPQRTPT DATPRPHNCH LASTRLEALG IGRRTPFDTA IRQVLAAFPW
RGAAQA
|
|---|
| |